RNA–Protein interactions for RNA: ENST00000419249.2

AGRN-202, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-202ENST00000419249 TRAV12-2A0A075B6T6 113 aa13.19□□□□□ -0.3
AGRN-202ENST00000419249 AKAP14Q86UN6 197 aa13.19□□□□□ -0.3
AGRN-202ENST00000419249 HYLS1Q96M11 299 aa13.19□□□□□ -0.3
AGRN-202ENST00000419249 ZNF471Q9BX82 626 aaPredicted RBP13.19□□□□□ -0.3
AGRN-202ENST00000419249 PGPA6NDG6 321 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 UMAD1C9J7I0 102 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 DIRC3C9JPN6 131 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 CRISP2P16562 243 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 TAS2R60P59551 318 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 ERCC8Q13216 396 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 SSX7Q7RTT5 188 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 ZNF492Q9P255 531 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 RYR2Q92736 4967 aa13.18□□□□□ -0.3
AGRN-202ENST00000419249 IGKV2-40A0A087WW87 121 aaPredicted RBP13.17□□□□□ -0.3
AGRN-202ENST00000419249 TEX48A0A1B0GUV7 120 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 NUPR2A6NF83 97 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 KLLNB2CW77 178 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 H7BYZ3 331 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 PFDN1O60925 122 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 IGKV2D-40P01614 121 aaPredicted RBP13.17□□□□□ -0.3
AGRN-202ENST00000419249 LGALSLQ3ZCW2 172 aaPredicted RBP13.17□□□□□ -0.3
AGRN-202ENST00000419249 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 STOML3Q8TAV4 291 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 CMTM2Q8TAZ6 248 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 TMED6Q8WW62 240 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 VGLL1Q99990 258 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 SACSQ9NZJ4 4579 aa13.17□□□□□ -0.3
AGRN-202ENST00000419249 LOC102723971A0A1B0GUV8 181 aa13.16□□□□□ -0.3
AGRN-202ENST00000419249 CXorf65A6NEN9 183 aa13.16□□□□□ -0.3
AGRN-202ENST00000419249 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
AGRN-202ENST00000419249 KIR3DS1Q14943 382 aa13.16□□□□□ -0.3
AGRN-202ENST00000419249 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
AGRN-202ENST00000419249 LINC01587Q99440 93 aa13.16□□□□□ -0.3
AGRN-202ENST00000419249 LENEPQ9Y5L5 61 aa13.16□□□□□ -0.3
AGRN-202ENST00000419249 PLECQ15149 4684 aaKnown RBP13.16□□□□□ -0.3
AGRN-202ENST00000419249 hCG_2014768A0A024R1R8 64 aa13.15□□□□□ -0.3
AGRN-202ENST00000419249 A0A1W2PRE2 83 aa13.15□□□□□ -0.3
AGRN-202ENST00000419249 TPT1P13693 172 aaKnown RBP13.15□□□□□ -0.3
AGRN-202ENST00000419249 ZNF138P52744 262 aa13.15□□□□□ -0.3
AGRN-202ENST00000419249 PMS2P11Q13670 270 aa13.15□□□□□ -0.3
AGRN-202ENST00000419249 SERTM2A0A1B0GWG4 89 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 C7orf71A4D174 169 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 C11orf94C9JXX5 98 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 SPART-AS1P0CW21 52 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 DPPA3Q6W0C5 159 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 ZNF493Q6ZR52 646 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 ZFAND2AQ8N6M9 145 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 C5orf17Q8NAS9 161 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 PHLDA1Q8WV24 401 aaPredicted RBP13.14□□□□□ -0.31
AGRN-202ENST00000419249 PLA2G2EQ9NZK7 142 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 DKK2Q9UBU2 259 aa13.14□□□□□ -0.31
AGRN-202ENST00000419249 ZNF705GA8MUZ8 300 aaPredicted RBP13.13□□□□□ -0.31
AGRN-202ENST00000419249 NIPSNAP3BQ9BS92 247 aa13.13□□□□□ -0.31
AGRN-202ENST00000419249 NKX6-2Q9C056 277 aaPredicted RBP13.13□□□□□ -0.31
AGRN-202ENST00000419249 CELA1Q9UNI1 258 aa13.13□□□□□ -0.31
AGRN-202ENST00000419249 KLK5Q9Y337 293 aaPredicted RBP13.13□□□□□ -0.31
AGRN-202ENST00000419249 ALMS1Q8TCU4 4167 aa13.13□□□□□ -0.31
AGRN-202ENST00000419249 MAP1LC3B2A6NCE7 125 aa13.12□□□□□ -0.31
AGRN-202ENST00000419249 ZNF324O75467 553 aaPredicted RBP13.12□□□□□ -0.31
AGRN-202ENST00000419249 GPX1P07203 203 aa13.12□□□□□ -0.31
AGRN-202ENST00000419249 C12orf74Q32Q52 190 aa13.12□□□□□ -0.31
AGRN-202ENST00000419249 EIF5AL1Q6IS14 154 aaKnown RBP13.12□□□□□ -0.31
AGRN-202ENST00000419249 MBD3L1Q8WWY6 194 aa13.12□□□□□ -0.31
AGRN-202ENST00000419249 C16orf74Q96GX8 76 aa13.12□□□□□ -0.31
AGRN-202ENST00000419249 PYGO2Q9BRQ0 406 aa13.12□□□□□ -0.31
AGRN-202ENST00000419249 LINC00467Q9BRT7 94 aa13.12□□□□□ -0.31
AGRN-202ENST00000419249 MAP1LC3BQ9GZQ8 125 aa13.12□□□□□ -0.31
AGRN-202ENST00000419249 YTHDF2Q9Y5A9 579 aaKnown RBP13.12□□□□□ -0.31
AGRN-202ENST00000419249 DNAH1Q9P2D7 4330 aa13.11□□□□□ -0.31
AGRN-202ENST00000419249 TRAV12-3A0A0B4J271 114 aa13.11□□□□□ -0.31
AGRN-202ENST00000419249 EMP1P54849 157 aa13.11□□□□□ -0.31
AGRN-202ENST00000419249 SUMO1P63165 101 aaKnown RBP13.11□□□□□ -0.31
AGRN-202ENST00000419249 TMEM263Q8WUH6 116 aaKnown RBP13.11□□□□□ -0.31
AGRN-202ENST00000419249 LCE6AA0A183 80 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 PLAC8L1A1L4L8 177 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 LYRM9A8MSI8 78 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 GGTLC3B5MD39 225 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 J3KRW8 73 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 TCRAP04437 139 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 PRM2P04554 102 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 AZU1P20160 251 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 FHITP49789 147 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 CD300CQ08708 224 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 FAM222AQ5U5X8 452 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 GOLT1AQ6ZVE7 132 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 SLC51BQ86UW2 128 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 CCDC28AQ8IWP9 274 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 IQCF2Q8IXL9 164 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 Q8TAT8 98 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 RNASE8Q8TDE3 154 aaKnown RBP13.1□□□□□ -0.31
AGRN-202ENST00000419249 TMPRSS5Q9H3S3 457 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 EPDR1Q9UM22 224 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
AGRN-202ENST00000419249 TRAV10A0A0B4J240 114 aa13.09□□□□□ -0.31
AGRN-202ENST00000419249 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
AGRN-202ENST00000419249 FBLL1A6NHQ2 334 aaKnown RBP13.09□□□□□ -0.31
AGRN-202ENST00000419249 K7EQM0 130 aa13.09□□□□□ -0.31
AGRN-202ENST00000419249 RNASE4P34096 147 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms