RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SLAQ13239 276 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 KLF5Q13887 457 aaPredicted RBP6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 WFDC11Q8NEX6 87 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 FOXC2Q99958 501 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 NDFIP1Q9BT67 221 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 DAZ1Q9NQZ3 744 aaKnown RBP6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 LENEPQ9Y5L5 61 aa6.9□□□□□ -1.3
LINCMD1-201ENST00000418518 UNC79Q9P2D8 2635 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 MXRA5Q9NR99 2828 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 IGHV3-66A0A0C4DH42 116 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 A0A1B0GUS0 222 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 GRIFINA4D1Z8 144 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 SPINK4O60575 86 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 LGALS1P09382 135 aaKnown RBP6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 BMI1P35226 326 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 CTRLP40313 264 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 RPS20P60866 119 aaKnown RBP6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 PAFAH1B2P68402 229 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 JOSD1Q15040 202 aaPredicted RBP6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 DMRTA1Q5VZB9 504 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 IGFL4Q6B9Z1 124 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 LCNL1Q6ZST4 164 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 REC114Q7Z4M0 266 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 TMEM256Q8N2U0 113 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 Q8TAT8 98 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 SMPXQ9UHP9 88 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 MYO9AB2RTY4 2548 aa6.89□□□□□ -1.31
LINCMD1-201ENST00000418518 IGHV3OR16-13A0A075B7E8 117 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 IGHV3-49A0A0A0MS15 119 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 IGHV3-74A0A0B4J1X5 117 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 A0A1B0GUT8 65 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 LGALS9O00182 355 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 NUPR1O60356 82 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 IGLC6P0CF74 106 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 SRIP30626 198 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 RAB4BP61018 213 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 LINC01559Q495D7 138 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 FAM106AQ4KMX7 169 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 C10orf99Q6UWK7 81 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 RNF182Q8N6D2 247 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 SIGLECL1Q8N7X8 197 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 C18orf32Q8TCD1 76 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 UBE2E2Q96LR5 201 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 AGPAT4-IT1Q9H0P7 198 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 NRN1Q9NPD7 142 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 UFC1Q9Y3C8 167 aa6.88□□□□□ -1.31
LINCMD1-201ENST00000418518 ZNF469Q96JG9 3925 aaPredicted RBP6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 TRBV7-9A0A0J9YWB2 115 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 TMEM189A5PLL7 270 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 F2Z2F3 143 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 CD5LO43866 347 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 SERF1AO75920 110 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 RPLP1P05386 114 aaKnown RBP6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 GZMBP10144 247 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 ZNF80P51504 273 aaPredicted RBP6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 ZNF138P52744 262 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 HIST1H1AQ02539 215 aaPredicted RBP6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 RIGQ13278 110 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 HIST2H2BCQ6DN03 193 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 ZNF493Q6ZR52 646 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 IL17RELQ6ZVW7 336 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 ZNF575Q86XF7 245 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 KCNS1Q96KK3 526 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 ASCL2Q99929 193 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 ALKBH7Q9BT30 221 aaPredicted RBP6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 RHPN1-AS1Q9BWJ2 59 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 CNFNQ9BYD5 112 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 NIT2Q9NQR4 276 aa6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 SONP18583 2426 aaKnown RBP6.87□□□□□ -1.31
LINCMD1-201ENST00000418518 LOC102724200A0A096LPH7 203 aaPredicted RBP6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 TMEM213A2RRL7 107 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 FABP5P3A8MUU1 101 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 OVOL1O14753 267 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 ARMS2P0C7Q2 107 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 ERCC8Q13216 396 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 KIAA1644Q3SXP7 199 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 TM4SF20Q53R12 229 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 BAGE3Q86Y29 109 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 FAM19A4Q96LR4 140 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 ITPR2Q14571 2701 aa6.86□□□□□ -1.31
LINCMD1-201ENST00000418518 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
LINCMD1-201ENST00000418518 PRB4P10163 310 aaPredicted RBP6.85□□□□□ -1.31
LINCMD1-201ENST00000418518 CAMPP49913 170 aa6.85□□□□□ -1.31
LINCMD1-201ENST00000418518 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
LINCMD1-201ENST00000418518 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
LINCMD1-201ENST00000418518 RCHY1Q96PM5 261 aa6.85□□□□□ -1.31
LINCMD1-201ENST00000418518 SSBP4Q9BWG4 385 aaPredicted RBP6.85□□□□□ -1.31
LINCMD1-201ENST00000418518 ZNF324O75467 553 aaPredicted RBP6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 GPX1P07203 203 aa6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 LYZL1Q6UWQ5 148 aa6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 ZFAND2AQ8N6M9 145 aa6.84□□□□□ -1.31
LINCMD1-201ENST00000418518 FER1L6-AS1Q8NA97 138 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms