RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 ZNF253O75346 499 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 CCNKO75909 580 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 C1QBP02746 253 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 ORM1P02763 201 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 OR4E1P0C645 316 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TNFSF8P32971 234 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TAS2R30P59541 319 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 ERCC8Q13216 396 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MORN5Q5VZ52 161 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 IQCF2Q8IXL9 164 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 DEFB104AQ8WTQ1 72 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 PCNPQ8WW12 178 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MRPL53Q96EL3 112 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SOSTQ9BQB4 213 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 GGACTQ9BVM4 153 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 AGPAT4-IT1Q9H0P7 198 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MRPL16Q9NX20 251 aaKnown RBP5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 PRELID1Q9Y255 219 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 IGHV1OR15-1A0A075B7D0 117 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TRAV5A0A0B4J249 113 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 LRCOL1A6NCL2 159 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 M0R3E3 92 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TSC22D2O75157 780 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 GYPEP15421 78 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 CAMLGP49069 296 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 UBE2MP61081 183 aaKnown RBP5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 BTN1A1Q13410 526 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 C12orf45Q8N5I9 185 aaPredicted RBP5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 OR1L4Q8NGR5 311 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 DYNC2LI1Q8TCX1 351 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 DEDD2Q8WXF8 326 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 FAM19A4Q96LR4 140 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MGST2Q99735 147 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 ARPC5LQ9BPX5 153 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TXNDC17Q9BRA2 123 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 FAM30AQ9NZY2 134 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TP53TG3Q9ULZ0 132 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 BOLA1Q9Y3E2 137 aa5.28□□□□□ -1.56
HLA-DPA1-241ENST00000417724 VPS13BQ7Z7G8 4022 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TRBV19A0A075B6N1 114 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 C9orf170A2RU37 121 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 C9JCJ5 164 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 HIST1H1EP10412 219 aaKnown RBP5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 CRISP2P16562 243 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 ZNF415Q09FC8 603 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 ARL16Q0P5N6 197 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 PYDC2Q56P42 97 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TMEM78Q5T7P6 136 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 C9orf47Q6ZRZ4 202 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 SH2D6Q7Z4S9 175 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 Q8N814 137 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 RAB2BQ8WUD1 216 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 PFDN5Q99471 154 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 SRRQ9GZT4 340 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 RCL1Q9Y2P8 373 aaKnown RBP5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TIMM9Q9Y5J7 89 aa5.27□□□□□ -1.57
HLA-DPA1-241ENST00000417724 IGHV3-38A0A0C4DH36 116 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 IBA57-AS1B1ANH7 110 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 SCGB1D2O95969 90 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 SMIM18P0DKX4 95 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 PDE6HQ13956 83 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 IAH1Q2TAA2 248 aaPredicted RBP5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 MIC13Q5XKP0 118 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 NRARPQ7Z6K4 114 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 LINC00528Q8N1L1 170 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 ZFAND2AQ8N6M9 145 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 OR10G4Q8NGN3 311 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 RASL10AQ92737 203 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TRIM63Q969Q1 353 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 ZNF479Q96JC4 524 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 SPXQ9BT56 116 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 AAMDCQ9H7C9 122 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 GSKIPQ9P0R6 139 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TMEM14CQ9P0S9 112 aa5.26□□□□□ -1.57
HLA-DPA1-241ENST00000417724 C7orf66A4D0T2 115 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 NDUFB4O95168 129 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 SFTA3P0C7M3 94 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 RPL29P47914 159 aaKnown RBP5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TMBIM6P55061 237 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TIRAPP58753 221 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 LINC01556Q5JQF7 62 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 EXOC3-AS1Q8N2X6 119 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 BLNKQ8WV28 456 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 BCL7BQ9BQE9 202 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 SLIRPQ9GZT3 109 aaKnown RBP5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 C20orf85Q9H1P6 137 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 Q9HAA7 133 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 ZNF492Q9P255 531 aa5.25□□□□□ -1.57
HLA-DPA1-241ENST00000417724 IGKV2-40A0A087WW87 121 aaPredicted RBP5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TRAV8-6A0A0B4J262 113 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TRBV7-9A0A0J9YWB2 115 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 L7N2F9 121 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 OXTP01178 125 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 IGKV2D-40P01614 121 aaPredicted RBP5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 PPT1P50897 306 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 ZNF138P52744 262 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 VAMP2P63027 116 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 TDRG1Q3Y452 100 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 PRR9Q5T870 116 aa5.24□□□□□ -1.57
HLA-DPA1-241ENST00000417724 Q6ZQT7 251 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms