RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 TIMM8BQ9Y5J9 83 aaPredicted RBP10.86□□□□□ -0.67
NUP50-204ENST00000417702 TRAV12-3A0A0B4J271 114 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 HMSDA8MTL9 139 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 OR10J4P0C629 311 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 ATP6V0CP27449 155 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 TAS2R45P59539 299 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 ERCC8Q13216 396 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 RPL7L1Q6DKI1 246 aaKnown RBP10.85□□□□□ -0.67
NUP50-204ENST00000417702 FAM122CQ6P4D5 195 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 OR2G3Q8NGZ4 309 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 RNASE8Q8TDE3 154 aaKnown RBP10.85□□□□□ -0.67
NUP50-204ENST00000417702 FXYD5Q96DB9 178 aa10.85□□□□□ -0.67
NUP50-204ENST00000417702 GNPNAT1Q96EK6 184 aaPredicted RBP10.85□□□□□ -0.67
NUP50-204ENST00000417702 A0A1W2PPV4 95 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 MBP02144 154 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 SLC25A5P05141 298 aaKnown RBP10.84□□□□□ -0.67
NUP50-204ENST00000417702 SERF2P84101 59 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 ZNF345Q14585 488 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 KHDC3LQ587J8 217 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 TMEM88Q6PEY1 159 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 PYGO2Q9BRQ0 406 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
NUP50-204ENST00000417702 NOP10Q9NPE3 64 aaKnown RBP10.84□□□□□ -0.67
NUP50-204ENST00000417702 A0A0D9SG52 128 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 C7orf71A4D174 169 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 CBY3A6NI87 242 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 F5H768 121 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 ATP5G1P05496 136 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 CSN1S1P47710 185 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 ATP5G3P48201 142 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 UBE2L3P68036 154 aaKnown RBP10.83□□□□□ -0.68
NUP50-204ENST00000417702 TMEM78Q5T7P6 136 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 C9orf47Q6ZRZ4 202 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 KCNRGQ8N5I3 272 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 C15orf53Q8NAA6 179 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 OR11H4Q8NGC9 324 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 OR10G4Q8NGN3 311 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 OR10G9Q8NGN4 311 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 OR10G7Q8NGN6 311 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 ST6GAL2Q96JF0 529 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 ARPC5LQ9BPX5 153 aa10.83□□□□□ -0.68
NUP50-204ENST00000417702 EPPK1P58107 5090 aaKnown RBP10.83□□□□□ -0.68
NUP50-204ENST00000417702 KMT2AQ03164 3969 aa10.82□□□□□ -0.68
NUP50-204ENST00000417702 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
NUP50-204ENST00000417702 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
NUP50-204ENST00000417702 SNURFLB1AK76 121 aa10.82□□□□□ -0.68
NUP50-204ENST00000417702 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
NUP50-204ENST00000417702 RAB2AP61019 212 aa10.82□□□□□ -0.68
NUP50-204ENST00000417702 RANP62826 216 aaKnown RBP10.82□□□□□ -0.68
NUP50-204ENST00000417702 TCTE3Q8IZS6 198 aa10.82□□□□□ -0.68
NUP50-204ENST00000417702 LYPD1Q8N2G4 141 aa10.82□□□□□ -0.68
NUP50-204ENST00000417702 PHYHIPLQ96FC7 376 aa10.82□□□□□ -0.68
NUP50-204ENST00000417702 KLLNB2CW77 178 aa10.81□□□□□ -0.68
NUP50-204ENST00000417702 GPX1P07203 203 aa10.81□□□□□ -0.68
NUP50-204ENST00000417702 NMBP08949 121 aa10.81□□□□□ -0.68
NUP50-204ENST00000417702 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
NUP50-204ENST00000417702 ZNF503Q96F45 646 aa10.81□□□□□ -0.68
NUP50-204ENST00000417702 FAM19A4Q96LR4 140 aa10.81□□□□□ -0.68
NUP50-204ENST00000417702 VGLL1Q99990 258 aa10.81□□□□□ -0.68
NUP50-204ENST00000417702 SH3BGRL3Q9H299 93 aa10.81□□□□□ -0.68
NUP50-204ENST00000417702 CYTL1Q9NRR1 136 aa10.81□□□□□ -0.68
NUP50-204ENST00000417702 KANTRA0A1W2PQU2 76 aa10.8□□□□□ -0.68
NUP50-204ENST00000417702 CRISP2P16562 243 aa10.8□□□□□ -0.68
NUP50-204ENST00000417702 CDC34P49427 236 aaPredicted RBP10.8□□□□□ -0.68
NUP50-204ENST00000417702 BTN1A1Q13410 526 aa10.8□□□□□ -0.68
NUP50-204ENST00000417702 PQLC2Q6ZP29 291 aa10.8□□□□□ -0.68
NUP50-204ENST00000417702 AKAP14Q86UN6 197 aa10.8□□□□□ -0.68
NUP50-204ENST00000417702 Q9H3A6 140 aa10.8□□□□□ -0.68
NUP50-204ENST00000417702 ZNF492Q9P255 531 aa10.8□□□□□ -0.68
NUP50-204ENST00000417702 BIRC6Q9NR09 4857 aa10.8□□□□□ -0.68
NUP50-204ENST00000417702 VPS13DQ5THJ4 4388 aa10.79□□□□□ -0.68
NUP50-204ENST00000417702 ZNF138P52744 262 aa10.79□□□□□ -0.68
NUP50-204ENST00000417702 CD300CQ08708 224 aa10.79□□□□□ -0.68
NUP50-204ENST00000417702 RNF212Q495C1 297 aa10.79□□□□□ -0.68
NUP50-204ENST00000417702 ZNF680Q8NEM1 530 aa10.79□□□□□ -0.68
NUP50-204ENST00000417702 RXFP4Q8TDU9 374 aa10.79□□□□□ -0.68
NUP50-204ENST00000417702 TRBV7-9A0A0J9YWB2 115 aa10.78□□□□□ -0.68
NUP50-204ENST00000417702 RBAKDNA6NC62 111 aa10.78□□□□□ -0.68
NUP50-204ENST00000417702 BCL2L11O43521 198 aa10.78□□□□□ -0.68
NUP50-204ENST00000417702 PFDN1O60925 122 aa10.78□□□□□ -0.68
NUP50-204ENST00000417702 ZNF324O75467 553 aaPredicted RBP10.78□□□□□ -0.68
NUP50-204ENST00000417702 FAM74A1Q5RGS3 127 aa10.78□□□□□ -0.68
NUP50-204ENST00000417702 EIF4E3Q8N5X7 224 aaKnown RBP10.78□□□□□ -0.68
NUP50-204ENST00000417702 ZFAND2AQ8N6M9 145 aa10.78□□□□□ -0.68
NUP50-204ENST00000417702 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
NUP50-204ENST00000417702 ACTR3CQ9C0K3 210 aaPredicted RBP10.78□□□□□ -0.68
NUP50-204ENST00000417702 GAGE12BA1L429 117 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 RGS13O14921 159 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 EIF3GO75821 320 aaKnown RBP eCLIP10.77□□□□□ -0.69
NUP50-204ENST00000417702 GAGE7O76087 117 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 NUDT3O95989 172 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 C1QBP02746 253 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 GAGE12FP0CL80 117 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 GAGE12GP0CL81 117 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 GAGE12IP0CL82 117 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 STAG3L2P0CL84 134 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 STAG3L3P0CL85 134 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 EIF5AP63241 154 aaKnown RBP10.77□□□□□ -0.69
NUP50-204ENST00000417702 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms