RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 IGKV2-40A0A087WW87 121 aaPredicted RBP10.53□□□□□ -0.72
UBXN4-203ENST00000416538 KLLNB2CW77 178 aa10.53□□□□□ -0.72
UBXN4-203ENST00000416538 E5RGE8 158 aa10.53□□□□□ -0.72
UBXN4-203ENST00000416538 NUDT3O95989 172 aa10.53□□□□□ -0.72
UBXN4-203ENST00000416538 IGKV2D-40P01614 121 aaPredicted RBP10.53□□□□□ -0.72
UBXN4-203ENST00000416538 LEPP41159 167 aa10.53□□□□□ -0.72
UBXN4-203ENST00000416538 CD300CQ08708 224 aa10.53□□□□□ -0.72
UBXN4-203ENST00000416538 Q6ZQT7 251 aa10.53□□□□□ -0.72
UBXN4-203ENST00000416538 MARVELD1Q9BSK0 173 aa10.53□□□□□ -0.72
UBXN4-203ENST00000416538 WDR61Q9GZS3 305 aaKnown RBP10.53□□□□□ -0.72
UBXN4-203ENST00000416538 AGPAT4-IT1Q9H0P7 198 aa10.53□□□□□ -0.72
UBXN4-203ENST00000416538 PRAF2O60831 178 aa10.52□□□□□ -0.73
UBXN4-203ENST00000416538 PDE6HQ13956 83 aa10.52□□□□□ -0.73
UBXN4-203ENST00000416538 C11orf72Q8NBR9 251 aa10.52□□□□□ -0.73
UBXN4-203ENST00000416538 PPP1R1CQ8WVI7 109 aa10.52□□□□□ -0.73
UBXN4-203ENST00000416538 ZNF503Q96F45 646 aa10.52□□□□□ -0.73
UBXN4-203ENST00000416538 PHYHIPLQ96FC7 376 aa10.52□□□□□ -0.73
UBXN4-203ENST00000416538 BATF3Q9NR55 127 aa10.52□□□□□ -0.73
UBXN4-203ENST00000416538 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.73
UBXN4-203ENST00000416538 GAGE12BA1L429 117 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 C7orf71A4D174 169 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 EIF3GO75821 320 aaKnown RBP eCLIP10.51□□□□□ -0.73
UBXN4-203ENST00000416538 GAGE7O76087 117 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 RLN2P04090 185 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 GAGE12FP0CL80 117 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 GAGE12GP0CL81 117 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 GAGE12IP0CL82 117 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 DEFA1P59665 94 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 DEFA3P59666 94 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 ICAM4Q14773 271 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 Q6ZTI0 123 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 ZFAND2AQ8N6M9 145 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 VGLL1Q99990 258 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 SLC25A31Q9H0C2 315 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 TMPRSS5Q9H3S3 457 aa10.51□□□□□ -0.73
UBXN4-203ENST00000416538 TRAV26-1A0A087WT03 109 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 ZNF324O75467 553 aaPredicted RBP10.5□□□□□ -0.73
UBXN4-203ENST00000416538 SLC25A5P05141 298 aaKnown RBP10.5□□□□□ -0.73
UBXN4-203ENST00000416538 OR10J4P0C629 311 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 CRISP2P16562 243 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 FAM122CQ6P4D5 195 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 PYGO2Q9BRQ0 406 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 ATG101Q9BSB4 218 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 KRTAP1-5Q9BYS1 174 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 PRELID1Q9Y255 219 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 TIMM9Q9Y5J7 89 aa10.5□□□□□ -0.73
UBXN4-203ENST00000416538 A0A0J9YY99 117 aa10.49□□□□□ -0.73
UBXN4-203ENST00000416538 MPC2O95563 127 aa10.49□□□□□ -0.73
UBXN4-203ENST00000416538 FAM3BP58499 235 aaPredicted RBP10.49□□□□□ -0.73
UBXN4-203ENST00000416538 CYCSP99999 105 aaKnown RBP10.49□□□□□ -0.73
UBXN4-203ENST00000416538 ZNF575Q86XF7 245 aa10.49□□□□□ -0.73
UBXN4-203ENST00000416538 Q8TAT8 98 aa10.49□□□□□ -0.73
UBXN4-203ENST00000416538 OR51M1Q9H341 326 aa10.49□□□□□ -0.73
UBXN4-203ENST00000416538 GSN-AS1Q9NRJ2 163 aa10.49□□□□□ -0.73
UBXN4-203ENST00000416538 FUT9Q9Y231 359 aa10.49□□□□□ -0.73
UBXN4-203ENST00000416538 HSPB11Q9Y547 144 aa10.49□□□□□ -0.73
UBXN4-203ENST00000416538 NBDYA0A0U1RRE5 68 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 SNURFLB1AK76 121 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 NBEAP1P0C6P0 100 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 DAZ2Q13117 558 aaKnown RBP10.48□□□□□ -0.73
UBXN4-203ENST00000416538 OR5I1Q13606 314 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 C1orf134Q5TEV5 83 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 CCDC28AQ8IWP9 274 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 ATP5SQ99766 215 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 MRPL32Q9BYC8 188 aaKnown RBP10.48□□□□□ -0.73
UBXN4-203ENST00000416538 SMIM3Q9BZL3 60 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 WFDC1Q9HC57 220 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 MBD2Q9UBB5 411 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 TP53TG3Q9ULZ0 132 aa10.48□□□□□ -0.73
UBXN4-203ENST00000416538 LOC100996750A0A140TA64 210 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 RNASE4P34096 147 aaKnown RBP10.47□□□□□ -0.73
UBXN4-203ENST00000416538 TNP2Q05952 138 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 SSX7Q7RTT5 188 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 LINC00477Q96M19 166 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 PAXXQ9BUH6 204 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 KRTAP4-6Q9BYQ5 205 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 AAMDCQ9H7C9 122 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 ZNF492Q9P255 531 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 KLF12Q9Y4X4 402 aa10.47□□□□□ -0.73
UBXN4-203ENST00000416538 SSNA1O43805 119 aa10.46□□□□□ -0.73
UBXN4-203ENST00000416538 M6PRP20645 277 aa10.46□□□□□ -0.73
UBXN4-203ENST00000416538 FFAR4Q5NUL3 377 aa10.46□□□□□ -0.73
UBXN4-203ENST00000416538 RXFP4Q8TDU9 374 aa10.46□□□□□ -0.73
UBXN4-203ENST00000416538 GNPNAT1Q96EK6 184 aaPredicted RBP10.46□□□□□ -0.73
UBXN4-203ENST00000416538 KCNIP2Q9NS61 270 aa10.46□□□□□ -0.73
UBXN4-203ENST00000416538 PCLOQ9Y6V0 5065 aa10.45□□□□□ -0.74
UBXN4-203ENST00000416538 OR7C2O60412 319 aa10.45□□□□□ -0.74
UBXN4-203ENST00000416538 CCL18P55774 89 aa10.45□□□□□ -0.74
UBXN4-203ENST00000416538 TCL1AP56279 114 aa10.45□□□□□ -0.74
UBXN4-203ENST00000416538 UBE2L3P68036 154 aaKnown RBP10.45□□□□□ -0.74
UBXN4-203ENST00000416538 ANXA2RQ3ZCQ2 193 aa10.45□□□□□ -0.74
UBXN4-203ENST00000416538 EIF4E3Q8N5X7 224 aaKnown RBP10.45□□□□□ -0.74
UBXN4-203ENST00000416538 ZNF680Q8NEM1 530 aa10.45□□□□□ -0.74
UBXN4-203ENST00000416538 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
UBXN4-203ENST00000416538 SPINK4O60575 86 aa10.44□□□□□ -0.74
UBXN4-203ENST00000416538 GPX1P07203 203 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms