RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 C9orf47Q6ZRZ4 202 aa16.05■□□□□ 0.16
CEACAM3-203ENST00000415495 LINC00482Q8N8I6 264 aa16.05■□□□□ 0.16
CEACAM3-203ENST00000415495 DEFB1P60022 68 aa16.04■□□□□ 0.16
CEACAM3-203ENST00000415495 LINC00322Q6ZN03 302 aaPredicted RBP16.04■□□□□ 0.16
CEACAM3-203ENST00000415495 COX8CQ7Z4L0 72 aa16.04■□□□□ 0.16
CEACAM3-203ENST00000415495 PRR25Q96S07 402 aa16.04■□□□□ 0.16
CEACAM3-203ENST00000415495 WNK1Q9H4A3 2382 aa16.04■□□□□ 0.16
CEACAM3-203ENST00000415495 RBPMS2Q6ZRY4 209 aaKnown RBP16.03■□□□□ 0.16
CEACAM3-203ENST00000415495 OR10G8Q8NGN5 311 aa16.03■□□□□ 0.16
CEACAM3-203ENST00000415495 RNASE7Q9H1E1 156 aaKnown RBP16.03■□□□□ 0.16
CEACAM3-203ENST00000415495 OSTCQ9NRP0 149 aa16.03■□□□□ 0.16
CEACAM3-203ENST00000415495 PPP1R14DQ9NXH3 145 aa16.03■□□□□ 0.16
CEACAM3-203ENST00000415495 TRAV25A0A0B4J276 109 aa16.02■□□□□ 0.16
CEACAM3-203ENST00000415495 PPP1R2P9O14990 202 aa16.02■□□□□ 0.16
CEACAM3-203ENST00000415495 ZNF688P0C7X2 276 aa16.02■□□□□ 0.16
CEACAM3-203ENST00000415495 ZNF705DP0CH99 300 aaPredicted RBP16.02■□□□□ 0.16
CEACAM3-203ENST00000415495 ZNF705BP0CI00 300 aaPredicted RBP16.02■□□□□ 0.16
CEACAM3-203ENST00000415495 Q8TAT8 98 aa16.02■□□□□ 0.16
CEACAM3-203ENST00000415495 YPEL4Q96NS1 127 aa16.02■□□□□ 0.16
CEACAM3-203ENST00000415495 GPR61Q9BZJ8 451 aa16.02■□□□□ 0.16
CEACAM3-203ENST00000415495 IZUMO1RA6ND01 250 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 CXorf65A6NEN9 183 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 H7BYZ3 331 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 PF4P02776 101 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 ERVFC1-1P60608 527 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 SAPCD1Q5SSQ6 148 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 FAM231DQ6ZW35 169 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 OR8A1Q8NGG7 326 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 ZC2HC1AQ96GY0 325 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 C8orf49Q96NF6 230 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 C19orf71A6NCJ1 209 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 NPIPB6E9PJ23 425 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 F6UB75 175 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 SNRPD3P62318 126 aaKnown RBP16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 ZNF492Q9P255 531 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 V9GYV3 84 aa16.01■□□□□ 0.15
CEACAM3-203ENST00000415495 CRIP1P50238 77 aa16■□□□□ 0.15
CEACAM3-203ENST00000415495 ZNF138P52744 262 aa16■□□□□ 0.15
CEACAM3-203ENST00000415495 PSMG4Q5JS54 123 aa16■□□□□ 0.15
CEACAM3-203ENST00000415495 NUDT10Q8NFP7 164 aa16■□□□□ 0.15
CEACAM3-203ENST00000415495 NUDT11Q96G61 164 aa16■□□□□ 0.15
CEACAM3-203ENST00000415495 LINC00477Q96M19 166 aa16■□□□□ 0.15
CEACAM3-203ENST00000415495 SPAG8Q99932 426 aaPredicted RBP16■□□□□ 0.15
CEACAM3-203ENST00000415495 ZNF256Q9Y2P7 627 aaPredicted RBP16■□□□□ 0.15
CEACAM3-203ENST00000415495 IBA57Q5T440 356 aaKnown RBP15.99■□□□□ 0.15
CEACAM3-203ENST00000415495 TMEM78Q5T7P6 136 aa15.99■□□□□ 0.15
CEACAM3-203ENST00000415495 PRR27Q6MZM9 219 aa15.99■□□□□ 0.15
CEACAM3-203ENST00000415495 OR10J6PQ8NGY7 276 aa15.99■□□□□ 0.15
CEACAM3-203ENST00000415495 BIN3Q9NQY0 253 aa15.99■□□□□ 0.15
CEACAM3-203ENST00000415495 SAP30O75446 220 aa15.98■□□□□ 0.15
CEACAM3-203ENST00000415495 IGLV1-51P01701 117 aa15.98■□□□□ 0.15
CEACAM3-203ENST00000415495 PFN1P07737 140 aaKnown RBP15.98■□□□□ 0.15
CEACAM3-203ENST00000415495 C15orf54Q8N8G6 183 aa15.98■□□□□ 0.15
CEACAM3-203ENST00000415495 ZNF747Q9BV97 191 aa15.98■□□□□ 0.15
CEACAM3-203ENST00000415495 COLCA2A8K830 154 aa15.97■□□□□ 0.15
CEACAM3-203ENST00000415495 CT45A10P0DMU9 189 aa15.97■□□□□ 0.15
CEACAM3-203ENST00000415495 TENM1Q9UKZ4 2725 aa15.97■□□□□ 0.15
CEACAM3-203ENST00000415495 GDF5OSQ5U4N7 250 aa15.97■□□□□ 0.15
CEACAM3-203ENST00000415495 SPATA3Q8NHX4 192 aa15.97■□□□□ 0.15
CEACAM3-203ENST00000415495 FAM19A4Q96LR4 140 aa15.97■□□□□ 0.15
CEACAM3-203ENST00000415495 LENEPQ9Y5L5 61 aa15.97■□□□□ 0.15
CEACAM3-203ENST00000415495 ZNF80P51504 273 aaPredicted RBP15.96■□□□□ 0.15
CEACAM3-203ENST00000415495 HIST1H1AQ02539 215 aaPredicted RBP15.96■□□□□ 0.15
CEACAM3-203ENST00000415495 ELOBQ15370 118 aa15.96■□□□□ 0.15
CEACAM3-203ENST00000415495 NDFIP1Q9BT67 221 aa15.96■□□□□ 0.15
CEACAM3-203ENST00000415495 ATRQ13535 2644 aa15.95■□□□□ 0.14
CEACAM3-203ENST00000415495 A0A0J9YX75 114 aa15.95■□□□□ 0.14
CEACAM3-203ENST00000415495 OR4C46A6NHA9 309 aa15.95■□□□□ 0.14
CEACAM3-203ENST00000415495 OR2K2Q8NGT1 345 aa15.95■□□□□ 0.14
CEACAM3-203ENST00000415495 IMMP2LQ96T52 175 aa15.95■□□□□ 0.14
CEACAM3-203ENST00000415495 URGCP-MRPS24S4R325 110 aa15.95■□□□□ 0.14
CEACAM3-203ENST00000415495 FBN1P35555 2871 aaKnown RBP15.95■□□□□ 0.14
CEACAM3-203ENST00000415495 GATCO43716 136 aaKnown RBP15.94■□□□□ 0.14
CEACAM3-203ENST00000415495 SMUG1Q53HV7 270 aa15.94■□□□□ 0.14
CEACAM3-203ENST00000415495 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.94■□□□□ 0.14
CEACAM3-203ENST00000415495 IL36BQ9NZH7 164 aa15.94■□□□□ 0.14
CEACAM3-203ENST00000415495 DEFB131AP59861 70 aa15.94■□□□□ 0.14
CEACAM3-203ENST00000415495 SAV1Q9H4B6 383 aaPredicted RBP15.94■□□□□ 0.14
CEACAM3-203ENST00000415495 SORL1Q92673 2214 aa15.93■□□□□ 0.14
CEACAM3-203ENST00000415495 ZNF705GA8MUZ8 300 aaPredicted RBP15.93■□□□□ 0.14
CEACAM3-203ENST00000415495 CD33P20138 364 aa15.93■□□□□ 0.14
CEACAM3-203ENST00000415495 FOXI2Q6ZQN5 318 aa15.93■□□□□ 0.14
CEACAM3-203ENST00000415495 ZFAND2AQ8N6M9 145 aa15.93■□□□□ 0.14
CEACAM3-203ENST00000415495 DAZAP1Q96EP5 407 aaKnown RBP15.93■□□□□ 0.14
CEACAM3-203ENST00000415495 MAP6D1Q9H9H5 199 aa15.93■□□□□ 0.14
CEACAM3-203ENST00000415495 TRBV7-9A0A0J9YWB2 115 aa15.92■□□□□ 0.14
CEACAM3-203ENST00000415495 P01737 135 aa15.92■□□□□ 0.14
CEACAM3-203ENST00000415495 PYGO2Q9BRQ0 406 aa15.92■□□□□ 0.14
CEACAM3-203ENST00000415495 SH2D1AO60880 128 aa15.91■□□□□ 0.14
CEACAM3-203ENST00000415495 CA1P00915 261 aaPredicted RBP15.91■□□□□ 0.14
CEACAM3-203ENST00000415495 CXCL1P09341 107 aa15.91■□□□□ 0.14
CEACAM3-203ENST00000415495 FAM3BP58499 235 aaPredicted RBP15.91■□□□□ 0.14
CEACAM3-203ENST00000415495 FAM162BQ5T6X4 162 aa15.91■□□□□ 0.14
CEACAM3-203ENST00000415495 EBLN2Q6P2I7 272 aa15.91■□□□□ 0.14
CEACAM3-203ENST00000415495 RPP21Q9H633 154 aaKnown RBP15.91■□□□□ 0.14
CEACAM3-203ENST00000415495 TGIF2-C20orf24A0A0A6YYL0 155 aa15.9■□□□□ 0.14
CEACAM3-203ENST00000415495 CRISP2P16562 243 aa15.9■□□□□ 0.14
CEACAM3-203ENST00000415495 ODF3L2Q3SX64 289 aa15.9■□□□□ 0.14
CEACAM3-203ENST00000415495 APRG1Q8IVJ8 170 aa15.9■□□□□ 0.14
CEACAM3-203ENST00000415495 WFDC9Q8NEX5 89 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms