RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 MITD1Q8WV92 249 aa13.23□□□□□ -0.29
UBXN4-202ENST00000415164 FAT1Q14517 4588 aa13.23□□□□□ -0.29
UBXN4-202ENST00000415164 TRBV19A0A075B6N1 114 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 C5orf51A6NDU8 294 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 MPDU1O75352 247 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 DNAH10OSP0CZ25 163 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 EXOC3-AS1Q8N2X6 119 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 C12orf45Q8N5I9 185 aaPredicted RBP13.22□□□□□ -0.29
UBXN4-202ENST00000415164 MRPL53Q96EL3 112 aaKnown RBP13.22□□□□□ -0.29
UBXN4-202ENST00000415164 C8orf49Q96NF6 230 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 ARPC5LQ9BPX5 153 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 C20orf85Q9H1P6 137 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 SLC39A9Q9NUM3 307 aa13.22□□□□□ -0.29
UBXN4-202ENST00000415164 IGKV2-40A0A087WW87 121 aaPredicted RBP13.21□□□□□ -0.29
UBXN4-202ENST00000415164 SPINK4O60575 86 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 ZNF253O75346 499 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 ZNF324O75467 553 aaPredicted RBP13.21□□□□□ -0.29
UBXN4-202ENST00000415164 IFNA5P01569 189 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 IGKV2D-40P01614 121 aaPredicted RBP13.21□□□□□ -0.29
UBXN4-202ENST00000415164 PYYP10082 97 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 BTCP35070 178 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 TCL1AP56279 114 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 S100A10P60903 97 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 LINC00477Q96M19 166 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 AGPAT4-IT1Q9H0P7 198 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 WDR83OSQ9Y284 106 aa13.21□□□□□ -0.29
UBXN4-202ENST00000415164 KLLNB2CW77 178 aa13.2□□□□□ -0.3
UBXN4-202ENST00000415164 PVALBP20472 110 aaPredicted RBP13.2□□□□□ -0.3
UBXN4-202ENST00000415164 FGF7P21781 194 aa13.2□□□□□ -0.3
UBXN4-202ENST00000415164 TMEM78Q5T7P6 136 aa13.2□□□□□ -0.3
UBXN4-202ENST00000415164 FAM122CQ6P4D5 195 aa13.2□□□□□ -0.3
UBXN4-202ENST00000415164 ST6GAL2Q96JF0 529 aa13.2□□□□□ -0.3
UBXN4-202ENST00000415164 C18orf15Q96N68 181 aa13.2□□□□□ -0.3
UBXN4-202ENST00000415164 AAMDCQ9H7C9 122 aa13.2□□□□□ -0.3
UBXN4-202ENST00000415164 PRELID1Q9Y255 219 aa13.2□□□□□ -0.3
UBXN4-202ENST00000415164 PRAF2O60831 178 aa13.19□□□□□ -0.3
UBXN4-202ENST00000415164 Q5VSD8 79 aa13.19□□□□□ -0.3
UBXN4-202ENST00000415164 NFE4Q86UQ8 179 aa13.19□□□□□ -0.3
UBXN4-202ENST00000415164 LYPD1Q8N2G4 141 aa13.19□□□□□ -0.3
UBXN4-202ENST00000415164 FRZBQ92765 325 aa13.19□□□□□ -0.3
UBXN4-202ENST00000415164 PRO0255Q9UI72 69 aa13.19□□□□□ -0.3
UBXN4-202ENST00000415164 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 E5RGE8 158 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 NDUFB4O95168 129 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
UBXN4-202ENST00000415164 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
UBXN4-202ENST00000415164 ICAM4Q14773 271 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 PRR9Q5T870 116 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 CDPF1Q6NVV7 123 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 Q6ZQT7 251 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 LINC00467Q9BRT7 94 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 GPN1Q9HCN4 374 aaPredicted RBP13.18□□□□□ -0.3
UBXN4-202ENST00000415164 HHLA3Q9XRX5 114 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 LY96Q9Y6Y9 160 aa13.18□□□□□ -0.3
UBXN4-202ENST00000415164 TRAV6A0A075B6T7 132 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 TRAV9-2A0A087WT02 112 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 TRGV4A0A0C4DH28 118 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 XGP55808 180 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 MRPL23Q16540 153 aaKnown RBP13.17□□□□□ -0.3
UBXN4-202ENST00000415164 IBA57Q5T440 356 aaKnown RBP13.17□□□□□ -0.3
UBXN4-202ENST00000415164 LYPD5Q6UWN5 251 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 STX12Q86Y82 276 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 FAM19A4Q96LR4 140 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 VGLL1Q99990 258 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 SEC22CQ9BRL7 303 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
UBXN4-202ENST00000415164 A0A087WTM6 91 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 IGSF23A1L1A6 192 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 IL7P13232 177 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 S100A11P31949 105 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 SULT1A1P50225 295 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 CRYBA4P53673 196 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 KRTAP10-1P60331 282 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 SLAQ13239 276 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 GCSAMLQ5JQS6 135 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 NEGR1Q7Z3B1 354 aa13.16□□□□□ -0.3
UBXN4-202ENST00000415164 PCNPQ8WW12 178 aaKnown RBP13.16□□□□□ -0.3
UBXN4-202ENST00000415164 SDHCQ99643 169 aaPredicted RBP13.16□□□□□ -0.3
UBXN4-202ENST00000415164 SMR3BP02814 79 aaPredicted RBP13.15□□□□□ -0.3
UBXN4-202ENST00000415164 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
UBXN4-202ENST00000415164 CRISP2P16562 243 aa13.15□□□□□ -0.3
UBXN4-202ENST00000415164 SRIP30626 198 aa13.15□□□□□ -0.3
UBXN4-202ENST00000415164 HBG1P69891 147 aa13.15□□□□□ -0.3
UBXN4-202ENST00000415164 HBG2P69892 147 aa13.15□□□□□ -0.3
UBXN4-202ENST00000415164 PDE6HQ13956 83 aa13.15□□□□□ -0.3
UBXN4-202ENST00000415164 MUC21Q5SSG8 566 aa13.15□□□□□ -0.3
UBXN4-202ENST00000415164 Q8TAT8 98 aa13.15□□□□□ -0.3
UBXN4-202ENST00000415164 FHL2Q14192 279 aa13.14□□□□□ -0.31
UBXN4-202ENST00000415164 VWC2Q2TAL6 325 aa13.14□□□□□ -0.31
UBXN4-202ENST00000415164 CNPY1Q3B7I2 92 aa13.14□□□□□ -0.31
UBXN4-202ENST00000415164 C9orf47Q6ZRZ4 202 aa13.14□□□□□ -0.31
UBXN4-202ENST00000415164 WFDC10BQ8IUB3 73 aa13.14□□□□□ -0.31
UBXN4-202ENST00000415164 ZFAND2AQ8N6M9 145 aa13.14□□□□□ -0.31
UBXN4-202ENST00000415164 C2orf50Q96LR7 162 aa13.14□□□□□ -0.31
UBXN4-202ENST00000415164 LYRM2Q9NU23 88 aaPredicted RBP13.14□□□□□ -0.31
UBXN4-202ENST00000415164 VPS13BQ7Z7G8 4022 aa13.13□□□□□ -0.31
UBXN4-202ENST00000415164 HAMPP81172 84 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms