RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 PIFOQ8TCI5 191 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 CNFNQ9BYD5 112 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 DKK2Q9UBU2 259 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 KLK9Q9UKQ9 250 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 MINOS1-NBL1R4GNA1 71 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 K7EMI3 77 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 CTSGP08311 255 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 CKS2P33552 79 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 NHLH1Q02575 133 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 KIR3DS1Q14943 382 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 PRR30Q53SZ7 412 aaPredicted RBP7.62□□□□□ -1.19
CD44-206ENST00000415148 CSTL1Q9H114 145 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 SMAD5-AS1Q9Y6J3 95 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 IGKV2-40A0A087WW87 121 aaPredicted RBP7.61□□□□□ -1.19
CD44-206ENST00000415148 RBAKDNA6NC62 111 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 A6NDN8 102 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 GAGE10A6NGK3 116 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 FABP5P3A8MUU1 101 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 NPYP01303 97 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 IGKV2D-40P01614 121 aaPredicted RBP7.61□□□□□ -1.19
CD44-206ENST00000415148 TWIST1Q15672 202 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 ADAMTSL5Q6ZMM2 481 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 OR4X2Q8NGF9 303 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 IFI27L1Q96BM0 104 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 C18orf15Q96N68 181 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 MSRB1Q9NZV6 116 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 H3BRM9 83 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 K7ENP7 123 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 IGHG4P01861 327 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 HLA-DMBP28068 263 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 ZNF80P51504 273 aaPredicted RBP7.61□□□□□ -1.19
CD44-206ENST00000415148 Q8TAT8 98 aa7.61□□□□□ -1.19
CD44-206ENST00000415148 IGKV2D-26A0A0A0MRZ7 120 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 NCBP2LA6PVI3 153 aaKnown RBP7.6□□□□□ -1.19
CD44-206ENST00000415148 SMAD7O15105 426 aaKnown RBP7.6□□□□□ -1.19
CD44-206ENST00000415148 IGHV3-23P01764 117 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 KLRD1Q13241 179 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 MAP1LC3AQ9H492 121 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 IGHV3OR16-8A0A075B7F1 116 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 NDUFS7O75251 213 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 NMUP48645 174 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 HSD52Q0P140 79 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 VMO1Q7Z5L0 202 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 PSMG3-AS1Q96PY0 264 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 VGLL1Q99990 258 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 ACACAQ13085 2346 aa7.6□□□□□ -1.19
CD44-206ENST00000415148 A1L4Q6 167 aa7.59□□□□□ -1.19
CD44-206ENST00000415148 NDPQ00604 133 aa7.59□□□□□ -1.19
CD44-206ENST00000415148 RNF185Q96GF1 192 aa7.59□□□□□ -1.19
CD44-206ENST00000415148 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
CD44-206ENST00000415148 SPTBN2O15020 2390 aa7.59□□□□□ -1.19
CD44-206ENST00000415148 A0A0G2JLM5 398 aa7.59□□□□□ -1.2
CD44-206ENST00000415148 GATA1P15976 413 aaPredicted RBP7.59□□□□□ -1.2
CD44-206ENST00000415148 TMEM11P17152 192 aa7.59□□□□□ -1.2
CD44-206ENST00000415148 FCER1GP30273 86 aa7.59□□□□□ -1.2
CD44-206ENST00000415148 C11orf71Q6IPW1 123 aa7.59□□□□□ -1.2
CD44-206ENST00000415148 FAM110DQ8TAY7 271 aaPredicted RBP7.59□□□□□ -1.2
CD44-206ENST00000415148 SLC50A1Q9BRV3 221 aa7.59□□□□□ -1.2
CD44-206ENST00000415148 ZMAT4Q9H898 229 aa7.59□□□□□ -1.2
CD44-206ENST00000415148 CACNA1BQ00975 2339 aa7.58□□□□□ -1.2
CD44-206ENST00000415148 IGHV7-81A0A0B4J1V7 117 aa7.58□□□□□ -1.2
CD44-206ENST00000415148 FAM90A27PA6NNH2 459 aa7.58□□□□□ -1.2
CD44-206ENST00000415148 K7EP34 96 aa7.58□□□□□ -1.2
CD44-206ENST00000415148 K7ERJ3 54 aa7.58□□□□□ -1.2
CD44-206ENST00000415148 ORM1P02763 201 aa7.58□□□□□ -1.2
CD44-206ENST00000415148 GTF2H5Q6ZYL4 71 aa7.58□□□□□ -1.2
CD44-206ENST00000415148 HRNRQ86YZ3 2850 aaPredicted RBP7.58□□□□□ -1.2
CD44-206ENST00000415148 ABCA4P78363 2273 aa7.58□□□□□ -1.2
CD44-206ENST00000415148 GOSR1O95249 250 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 PPIFP30405 207 aaKnown RBP7.57□□□□□ -1.2
CD44-206ENST00000415148 SMIM15Q7Z3B0 74 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 DYNAPQ8N1N2 210 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 ZNF502Q8TBZ5 544 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 AP1S3Q96PC3 154 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 HIF1ANQ9NWT6 349 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 SMPXQ9UHP9 88 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 MSRB2Q9Y3D2 182 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 WNK2Q9Y3S1 2297 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 PRSS47A8MTI9 375 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 K7ERU9 68 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 BUB3O43684 328 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 EVI2AP22794 236 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 GRNP28799 593 aaKnown RBP7.57□□□□□ -1.2
CD44-206ENST00000415148 FXYD2P54710 66 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 Q8N9W7 124 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 MRPL53Q96EL3 112 aaKnown RBP7.57□□□□□ -1.2
CD44-206ENST00000415148 MED13LQ71F56 2210 aa7.57□□□□□ -1.2
CD44-206ENST00000415148 IGHV3-35A0A0C4DH35 117 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 G3V4G9 280 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 CCL21O00585 134 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 ZNF207O43670 478 aaKnown RBP7.56□□□□□ -1.2
CD44-206ENST00000415148 TNFRSF6BO95407 300 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 OR2K2Q8NGT1 345 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 ZFAND3Q9H8U3 227 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 HIGD1BQ9P298 99 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 LY6HO94772 140 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 NEGR1Q7Z3B1 354 aa7.56□□□□□ -1.2
CD44-206ENST00000415148 PTPRZ1P23471 2315 aaPredicted RBP7.56□□□□□ -1.2
CD44-206ENST00000415148 A0A1W2PPM0 123 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms