RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
SF3B1-204ENST00000414963 C10orf91Q5T1B1 145 aa10.56□□□□□ -0.72
SF3B1-204ENST00000414963 GDF5OSQ5U4N7 250 aa10.56□□□□□ -0.72
SF3B1-204ENST00000414963 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
SF3B1-204ENST00000414963 IGF2BP2-AS1Q96M15 143 aa10.56□□□□□ -0.72
SF3B1-204ENST00000414963 PSG8Q9UQ74 426 aa10.56□□□□□ -0.72
SF3B1-204ENST00000414963 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
SF3B1-204ENST00000414963 HLA-DRB4X5D2U9 266 aa10.56□□□□□ -0.72
SF3B1-204ENST00000414963 SORL1Q92673 2214 aa10.56□□□□□ -0.72
SF3B1-204ENST00000414963 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 H3BMM0 161 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 LTAP01374 205 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 ZNF705DP0CH99 300 aaPredicted RBP10.55□□□□□ -0.72
SF3B1-204ENST00000414963 ZNF705BP0CI00 300 aaPredicted RBP10.55□□□□□ -0.72
SF3B1-204ENST00000414963 CEBPGP53567 150 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 UBE2G1P62253 170 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
SF3B1-204ENST00000414963 ERCC8Q13216 396 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 TMEM78Q5T7P6 136 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 COX8CQ7Z4L0 72 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 APRG1Q8IVJ8 170 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 Q8N1Y9 231 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 FAM19A4Q96LR4 140 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 ODF3Q96PU9 254 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 SMIM7Q9BQ49 75 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 SEC11CQ9BY50 192 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 ZFP30Q9Y2G7 519 aa10.55□□□□□ -0.72
SF3B1-204ENST00000414963 TRBV20OR9-2A0A075B6H5 130 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 KNCNA6PVL3 124 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 KRBOX1C9JBD0 128 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 G3V4G9 280 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 CT45A10P0DMU9 189 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 PRB4P10163 310 aaPredicted RBP10.54□□□□□ -0.72
SF3B1-204ENST00000414963 KRTAP10-11P60412 298 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 ZNF674Q2M3X9 581 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 ACTL10Q5JWF8 245 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 SAPCD1Q5SSQ6 148 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 Q86TA4 180 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 MLST8Q9BVC4 326 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 LY96Q9Y6Y9 160 aa10.54□□□□□ -0.72
SF3B1-204ENST00000414963 CMYA5Q8N3K9 4069 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 ADCYAP1P18509 176 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 GNG4P50150 75 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 ZNF124Q15973 351 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 TMEM241Q24JQ0 296 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 CENPWQ5EE01 88 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 KPRPQ5T749 579 aaPredicted RBP10.53□□□□□ -0.72
SF3B1-204ENST00000414963 AMTNQ6UX39 209 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 PRNTQ86SH4 94 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 BAGE2Q86Y30 109 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 TVP23CQ96ET8 276 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 SGK494Q96LW2 274 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 PRR25Q96S07 402 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 CARHSP1Q9Y2V2 147 aaKnown RBP10.53□□□□□ -0.72
SF3B1-204ENST00000414963 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
SF3B1-204ENST00000414963 F8W036 122 aa10.52□□□□□ -0.73
SF3B1-204ENST00000414963 IGLV2-8P01709 118 aa10.52□□□□□ -0.73
SF3B1-204ENST00000414963 CRISP2P16562 243 aa10.52□□□□□ -0.73
SF3B1-204ENST00000414963 TRPT1Q86TN4 253 aaKnown RBP10.52□□□□□ -0.73
SF3B1-204ENST00000414963 TMEM183AQ8IXX5 376 aa10.52□□□□□ -0.73
SF3B1-204ENST00000414963 NIPSNAP3BQ9BS92 247 aa10.52□□□□□ -0.73
SF3B1-204ENST00000414963 NAT8Q9UHE5 227 aa10.52□□□□□ -0.73
SF3B1-204ENST00000414963 OCC1Q8TAD7 63 aa10.51□□□□□ -0.73
SF3B1-204ENST00000414963 Q8TAT8 98 aa10.51□□□□□ -0.73
SF3B1-204ENST00000414963 NDFIP1Q9BT67 221 aa10.51□□□□□ -0.73
SF3B1-204ENST00000414963 SDF2L1Q9HCN8 221 aa10.51□□□□□ -0.73
SF3B1-204ENST00000414963 TSPOP30536 169 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 LEPP41159 167 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 STHQ8IWL8 128 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 OR4B1Q8NGF8 309 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 WFDC10AQ9H1F0 79 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 NBEAL1Q6ZS30 2694 aa10.5□□□□□ -0.73
SF3B1-204ENST00000414963 RBMY1BA6NDE4 496 aaKnown RBP10.49□□□□□ -0.73
SF3B1-204ENST00000414963 RBMY1EA6NEQ0 496 aaKnown RBP10.49□□□□□ -0.73
SF3B1-204ENST00000414963 KLLNB2CW77 178 aa10.49□□□□□ -0.73
SF3B1-204ENST00000414963 RBMY1DP0C7P1 496 aaKnown RBP10.49□□□□□ -0.73
SF3B1-204ENST00000414963 PNRC1Q12796 327 aaPredicted RBP10.49□□□□□ -0.73
SF3B1-204ENST00000414963 BIN3Q9NQY0 253 aa10.49□□□□□ -0.73
SF3B1-204ENST00000414963 PGPEP1LA6NFU8 196 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 A8MZ25 164 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 K7EN84 100 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 GCGP01275 180 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 IGKV3-20P01619 116 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 AMBPP02760 352 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
SF3B1-204ENST00000414963 SMUG1Q53HV7 270 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 ZC2HC1AQ96GY0 325 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 ASCL2Q99929 193 aa10.48□□□□□ -0.73
SF3B1-204ENST00000414963 CDKN1BP46527 198 aa10.47□□□□□ -0.73
SF3B1-204ENST00000414963 CRIP1P50238 77 aa10.47□□□□□ -0.73
SF3B1-204ENST00000414963 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
SF3B1-204ENST00000414963 NHLRC2Q8NBF2 726 aa10.47□□□□□ -0.73
SF3B1-204ENST00000414963 SRD5A3Q9H8P0 318 aa10.47□□□□□ -0.73
SF3B1-204ENST00000414963 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms