RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 LOC102724200A0A096LPH7 203 aaPredicted RBP9.45□□□□□ -0.9
PTPRF-205ENST00000414879 SLAQ13239 276 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 CEP192Q8TEP8 1941 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 IGHV7-81A0A0B4J1V7 117 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 FAM120AOSQ5T036 256 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 TEX43Q6ZNM6 134 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 DOCK10Q96BY6 2186 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 K7EMT4 169 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 GZMBP10144 247 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 ZNF726P1Q15940 193 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 VGLL1Q99990 258 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 SIRPDQ9H106 197 aa9.45□□□□□ -0.9
PTPRF-205ENST00000414879 GGTLC3B5MD39 225 aa9.44□□□□□ -0.9
PTPRF-205ENST00000414879 RASL10AQ92737 203 aa9.44□□□□□ -0.9
PTPRF-205ENST00000414879 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
PTPRF-205ENST00000414879 I3L2K1 104 aa9.44□□□□□ -0.9
PTPRF-205ENST00000414879 IGHV4-59P01825 116 aa9.44□□□□□ -0.9
PTPRF-205ENST00000414879 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
PTPRF-205ENST00000414879 UBE2E2Q96LR5 201 aa9.44□□□□□ -0.9
PTPRF-205ENST00000414879 FNDC4Q9H6D8 234 aaPredicted RBP9.44□□□□□ -0.9
PTPRF-205ENST00000414879 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
PTPRF-205ENST00000414879 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 TMEM238C9JI98 176 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 K7EMI3 77 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 SPRNQ5BIV9 151 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 LY6G5BQ8NDX9 201 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 OR13C6PQ8NH95 151 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 TMEM141Q96I45 108 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.43□□□□□ -0.94e-7■■■□□ 15.9
PTPRF-205ENST00000414879 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 C14orf178Q8N769 122 aaPredicted RBP9.43□□□□□ -0.9
PTPRF-205ENST00000414879 C5orf56Q8N8D9 126 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 Q8N9W7 124 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 A8MWP6 167 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 EVI2AP22794 236 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 TOMM7Q9P0U1 55 aa9.43□□□□□ -0.9
PTPRF-205ENST00000414879 TEX48A0A1B0GUV7 120 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 CGB3P0DN86 165 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 CGB7P0DN87 165 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 ERCC8Q13216 396 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 MRPL52Q86TS9 123 aaKnown RBP9.42□□□□□ -0.9
PTPRF-205ENST00000414879 C5orf30Q96GV9 206 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 NDUFAF3Q9BU61 184 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 COL5A1P20908 1838 aaPredicted RBP9.42□□□□□ -0.9
PTPRF-205ENST00000414879 SMIM27A0A1W2PRY6 76 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 CTAG1AP78358 180 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 MRPL16Q9NX20 251 aaKnown RBP9.42□□□□□ -0.9
PTPRF-205ENST00000414879 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 H7C2G1 150 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 TNFRSF13BO14836 293 aaPredicted RBP9.42□□□□□ -0.9
PTPRF-205ENST00000414879 APOMO95445 188 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 IGHG2P01859 326 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 HSD52Q0P140 79 aa9.42□□□□□ -0.9
PTPRF-205ENST00000414879 LTAP01374 205 aa9.41□□□□□ -0.9
PTPRF-205ENST00000414879 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.41□□□□□ -0.9
PTPRF-205ENST00000414879 K7EIM0 57 aa9.41□□□□□ -0.9
PTPRF-205ENST00000414879 ADCYAP1P18509 176 aa9.41□□□□□ -0.9
PTPRF-205ENST00000414879 C9orf66Q5T8R8 295 aa9.41□□□□□ -0.9
PTPRF-205ENST00000414879 LINC00469Q8N7U9 141 aa9.41□□□□□ -0.9
PTPRF-205ENST00000414879 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
PTPRF-205ENST00000414879 TNFRSF6BO95407 300 aa9.41□□□□□ -0.9
PTPRF-205ENST00000414879 Q8N8P6 123 aa9.41□□□□□ -0.9
PTPRF-205ENST00000414879 HOXD3P31249 432 aaPredicted RBP9.4□□□□□ -0.9
PTPRF-205ENST00000414879 C14orf144Q96I85 54 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 ANKHD1Q8IWZ3 2542 aaKnown RBP9.4□□□□□ -0.9
PTPRF-205ENST00000414879 LOC105371267A0A1B0GV96 52 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 CCL24O00175 119 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 Q8N7P7 452 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 V9GYV3 84 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 MED13Q9UHV7 2174 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 LINC00479Q96M42 142 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 NCKAP5O14513 1909 aa9.4□□□□□ -0.9
PTPRF-205ENST00000414879 IGLV2-23P01705 113 aa9.4□□□□□ -0.91
PTPRF-205ENST00000414879 GPHB5Q86YW7 130 aa9.4□□□□□ -0.91
PTPRF-205ENST00000414879 C20orf78Q9BR46 151 aa9.4□□□□□ -0.91
PTPRF-205ENST00000414879 NCR2O95944 276 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 MSMPQ1L6U9 139 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 ODF3L1Q8IXM7 274 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 AMN1Q8IY45 258 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
PTPRF-205ENST00000414879 WFDC12Q8WWY7 111 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 ST6GALNAC6Q969X2 333 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 SS18Q15532 418 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 PCDH15Q96QU1 1955 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 I3L3M4 83 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 SLC25A20O43772 301 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 SPINK13Q1W4C9 94 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 GSN-AS1Q9NRJ2 163 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 ODF3BA8MYP8 253 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 MYCNOSP40205 109 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
PTPRF-205ENST00000414879 HTTP42858 3142 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 DAD1P61803 113 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms