RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TRAV9-1A0A075B6T8 112 aa14.85□□□□□ -0.03
SHANK3-202ENST00000414786 LRP5O75197 1615 aa14.85□□□□□ -0.03
SHANK3-202ENST00000414786 NCR3O14931 201 aa14.85□□□□□ -0.03
SHANK3-202ENST00000414786 RNF144BQ7Z419 303 aa14.85□□□□□ -0.03
SHANK3-202ENST00000414786 HS3ST6Q96QI5 342 aa14.85□□□□□ -0.03
SHANK3-202ENST00000414786 WDR86Q86TI4 376 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 BOD1L2Q8IYS8 172 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 CCL24O00175 119 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 SMPXQ9UHP9 88 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 MYLKQ15746 1914 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 CCL18P55774 89 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 A0A096LNI7 61 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 FGF6P10767 208 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 C9orf47Q6ZRZ4 202 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 PLXNA1Q9UIW2 1896 aa14.84□□□□□ -0.03
SHANK3-202ENST00000414786 SLURP1P55000 103 aa14.83□□□□□ -0.03
SHANK3-202ENST00000414786 CFHR4Q92496 578 aa14.83□□□□□ -0.03
SHANK3-202ENST00000414786 ADAMTSL3P82987 1691 aa14.83□□□□□ -0.04
SHANK3-202ENST00000414786 IGHV4-59P01825 116 aa14.83□□□□□ -0.04
SHANK3-202ENST00000414786 U3KQE9 123 aa14.83□□□□□ -0.04
SHANK3-202ENST00000414786 CACNA1EQ15878 2313 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 ZFP36P26651 326 aaKnown RBP14.82□□□□□ -0.04
SHANK3-202ENST00000414786 RNF138Q8WVD3 245 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 WIPF3A6NGB9 483 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 CAMK2N2Q96S95 79 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 HIST1H2BLQ99880 126 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 ZNF124Q15973 351 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 SHISA9B4DS77 424 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 IGFBP3P17936 291 aaPredicted RBP14.82□□□□□ -0.04
SHANK3-202ENST00000414786 WDR83OSQ9Y284 106 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 NDUFS7O75251 213 aa14.82□□□□□ -0.04
SHANK3-202ENST00000414786 LAIR2Q6ISS4 152 aa14.81□□□□□ -0.04
SHANK3-202ENST00000414786 CDKN1BP46527 198 aa14.81□□□□□ -0.04
SHANK3-202ENST00000414786 TAF1LQ8IZX4 1826 aa14.81□□□□□ -0.04
SHANK3-202ENST00000414786 MARF1Q9Y4F3 1742 aaKnown RBP14.81□□□□□ -0.04
SHANK3-202ENST00000414786 SDHAF1A6NFY7 115 aa14.81□□□□□ -0.04
SHANK3-202ENST00000414786 H0YIZ8 118 aa14.81□□□□□ -0.04
SHANK3-202ENST00000414786 K7EMI3 77 aa14.81□□□□□ -0.04
SHANK3-202ENST00000414786 GPHB5Q86YW7 130 aa14.81□□□□□ -0.04
SHANK3-202ENST00000414786 GVINP1Q7Z2Y8 2422 aa14.81□□□□□ -0.04
SHANK3-202ENST00000414786 DLEC1Q9Y238 1755 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 SYS1-DBNDD2H3BUS1 97 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 ANKRD39Q53RE8 183 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 WIPF2Q8TF74 440 aaPredicted RBP14.8□□□□□ -0.04
SHANK3-202ENST00000414786 H0Y9J4 135 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 DEFB112Q30KQ8 113 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 GBF1Q92538 1859 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 RHODO00212 210 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 GNRH2O43555 120 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 C2orf66Q6UXQ4 117 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 LOC285556D6RIA3 1793 aa14.8□□□□□ -0.04
SHANK3-202ENST00000414786 TET1Q8NFU7 2136 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 A8MWP6 167 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 CTSGP08311 255 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 C15orf53Q8NAA6 179 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 IGHV1-24A0A0C4DH33 117 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 GYPEP15421 78 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 KLHDC3Q9BQ90 382 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 C3orf79P0CE67 100 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 NDUFA12Q9UI09 145 aa14.79□□□□□ -0.04
SHANK3-202ENST00000414786 CRYBA4P53673 196 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 TSSC4Q9Y5U2 329 aaPredicted RBP14.78□□□□□ -0.04
SHANK3-202ENST00000414786 ROS1P08922 2347 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 HLA-DMBP28068 263 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 Q86TA4 180 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 IGHV2-70DA0A0C4DH43 119 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 NTN3O00634 580 aaPredicted RBP14.78□□□□□ -0.04
SHANK3-202ENST00000414786 GP9P14770 177 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 LINC01549A6NIU2 74 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 PROP1O75360 226 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 EIF4EBP2Q13542 120 aaPredicted RBP14.78□□□□□ -0.04
SHANK3-202ENST00000414786 TPSG1Q9NRR2 321 aa14.78□□□□□ -0.04
SHANK3-202ENST00000414786 IGKV2-24A0A0C4DH68 120 aa14.77□□□□□ -0.04
SHANK3-202ENST00000414786 K7ERJ3 54 aa14.77□□□□□ -0.04
SHANK3-202ENST00000414786 CNOT1A5YKK6 2376 aaKnown RBP14.77□□□□□ -0.04
SHANK3-202ENST00000414786 TRAV4A0A0B4J268 109 aa14.77□□□□□ -0.04
SHANK3-202ENST00000414786 K7ENP7 123 aa14.77□□□□□ -0.05
SHANK3-202ENST00000414786 AMBPP02760 352 aa14.77□□□□□ -0.05
SHANK3-202ENST00000414786 ANK1P16157 1881 aa14.76□□□□□ -0.05
SHANK3-202ENST00000414786 COX7B2Q8TF08 81 aa14.76□□□□□ -0.05
SHANK3-202ENST00000414786 CARD19Q96LW7 228 aa14.76□□□□□ -0.05
SHANK3-202ENST00000414786 USF3Q68DE3 2245 aa14.76□□□□□ -0.05
SHANK3-202ENST00000414786 AMTNQ6UX39 209 aa14.75□□□□□ -0.05
SHANK3-202ENST00000414786 OOSP1A8MZH6 123 aa14.75□□□□□ -0.05
SHANK3-202ENST00000414786 DIAPH2-AS1Q14236 149 aa14.75□□□□□ -0.05
SHANK3-202ENST00000414786 SHANK1Q9Y566 2161 aa14.75□□□□□ -0.05
SHANK3-202ENST00000414786 TMEM75Q8N9X5 138 aa14.75□□□□□ -0.05
SHANK3-202ENST00000414786 SEC61GP60059 68 aa14.74□□□□□ -0.05
SHANK3-202ENST00000414786 LINC01551Q86U37 167 aa14.74□□□□□ -0.05
SHANK3-202ENST00000414786 FAM104BQ5XKR9 115 aa14.74□□□□□ -0.05
SHANK3-202ENST00000414786 SHANK2-AS3Q9BTD1 123 aa14.74□□□□□ -0.05
SHANK3-202ENST00000414786 PSME4Q14997 1843 aa14.74□□□□□ -0.05
SHANK3-202ENST00000414786 STRCP1A6NGW2 1772 aa14.73□□□□□ -0.05
SHANK3-202ENST00000414786 PKDREJQ9NTG1 2253 aa14.73□□□□□ -0.05
SHANK3-202ENST00000414786 GRNP28799 593 aaKnown RBP14.73□□□□□ -0.05
SHANK3-202ENST00000414786 HIST3H2BBQ8N257 126 aa14.73□□□□□ -0.05
SHANK3-202ENST00000414786 ACYP1P07311 99 aa14.73□□□□□ -0.05
SHANK3-202ENST00000414786 TMEM258P61165 79 aa14.73□□□□□ -0.05
SHANK3-202ENST00000414786 PFN1P07737 140 aaKnown RBP14.73□□□□□ -0.05
SHANK3-202ENST00000414786 UBE2CO00762 179 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms