RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.94□□□□□ -0.5
SHMT2-202ENST00000414700 CLPSL1A2RUU4 121 aa11.94□□□□□ -0.5
SHMT2-202ENST00000414700 OR10J4P0C629 311 aa11.94□□□□□ -0.5
SHMT2-202ENST00000414700 YTHDF2Q9Y5A9 579 aaKnown RBP11.94□□□□□ -0.5
SHMT2-202ENST00000414700 TRAV9-2A0A087WT02 112 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 M0QZ24 198 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 VAMP3Q15836 100 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 KHDC1LQ5JSQ8 128 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 PRIMA1Q86XR5 153 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 OR4F17Q8NGA8 305 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 TSKUQ8WUA8 353 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 UBE2E2Q96LR5 201 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 HLA-DQA1P01909 254 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 ARL3P36405 182 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 DEFB136Q30KP8 78 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 OCIAD2Q56VL3 154 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 PATE2Q6UY27 113 aa11.93□□□□□ -0.5
SHMT2-202ENST00000414700 SEPSECSQ9HD40 501 aaKnown RBP11.93□□□□□ -0.5
SHMT2-202ENST00000414700 BMPR1BO00238 502 aa11.92□□□□□ -0.5
SHMT2-202ENST00000414700 IL4P05112 153 aa11.92□□□□□ -0.5
SHMT2-202ENST00000414700 ORM2P19652 201 aa11.92□□□□□ -0.5
SHMT2-202ENST00000414700 SRIP30626 198 aa11.92□□□□□ -0.5
SHMT2-202ENST00000414700 KRTAP10-3P60369 221 aa11.92□□□□□ -0.5
SHMT2-202ENST00000414700 MORN5Q5VZ52 161 aa11.92□□□□□ -0.5
SHMT2-202ENST00000414700 ATOH7Q8N100 152 aa11.92□□□□□ -0.5
SHMT2-202ENST00000414700 CST9LQ9H4G1 147 aa11.92□□□□□ -0.5
SHMT2-202ENST00000414700 GCHFRP30047 84 aa11.91□□□□□ -0.5
SHMT2-202ENST00000414700 LYZP61626 148 aa11.91□□□□□ -0.5
SHMT2-202ENST00000414700 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
SHMT2-202ENST00000414700 KIAA1644Q3SXP7 199 aa11.91□□□□□ -0.5
SHMT2-202ENST00000414700 SPATA31B1PQ5VZV4 182 aa11.91□□□□□ -0.5
SHMT2-202ENST00000414700 OR1B1Q8NGR6 318 aa11.91□□□□□ -0.5
SHMT2-202ENST00000414700 CITED2Q99967 270 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-202ENST00000414700 PEF1Q9UBV8 284 aaKnown RBP11.91□□□□□ -0.5
SHMT2-202ENST00000414700 VWFP04275 2813 aa11.91□□□□□ -0.5
SHMT2-202ENST00000414700 LGALS1P09382 135 aaKnown RBP11.9□□□□□ -0.5
SHMT2-202ENST00000414700 NTF3P20783 257 aa11.9□□□□□ -0.5
SHMT2-202ENST00000414700 FAM19A2Q8N3H0 131 aa11.9□□□□□ -0.5
SHMT2-202ENST00000414700 RNF125Q96EQ8 232 aa11.9□□□□□ -0.5
SHMT2-202ENST00000414700 DUX3Q96PT4 197 aa11.9□□□□□ -0.5
SHMT2-202ENST00000414700 ATP6V0BQ99437 205 aa11.9□□□□□ -0.5
SHMT2-202ENST00000414700 OSTCQ9NRP0 149 aa11.9□□□□□ -0.5
SHMT2-202ENST00000414700 STAB1Q9NY15 2570 aa11.9□□□□□ -0.5
SHMT2-202ENST00000414700 COL6A5A8TX70 2615 aa11.9□□□□□ -0.51
SHMT2-202ENST00000414700 IGHV4OR15-8A0A075B7B6 117 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 A0A087WW49 117 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 A0A1W2PRX2 142 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 LCN12Q6JVE5 192 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 UNQ9165/PRO28630Q6UXU0 137 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 CSTL1Q9H114 145 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 TRRAPQ9Y4A5 3859 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 WI2-2373I1.2A0A1W2PRP0 233 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 GNG4P50150 75 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 KRTAP24-1Q3LI83 254 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 KLHL30-AS1Q8NEE0 82 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 RNF24Q9Y225 148 aa11.89□□□□□ -0.51
SHMT2-202ENST00000414700 COX7A2P2O60397 106 aa11.88□□□□□ -0.51
SHMT2-202ENST00000414700 APCSP02743 223 aa11.88□□□□□ -0.51
SHMT2-202ENST00000414700 IGLL1P15814 213 aa11.88□□□□□ -0.51
SHMT2-202ENST00000414700 PLP1P60201 277 aa11.88□□□□□ -0.51
SHMT2-202ENST00000414700 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
SHMT2-202ENST00000414700 C8orf86Q6ZUL3 223 aa11.88□□□□□ -0.51
SHMT2-202ENST00000414700 TRAV5A0A0B4J249 113 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 ZNF207O43670 478 aaKnown RBP11.87□□□□□ -0.51
SHMT2-202ENST00000414700 SPINK4O60575 86 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 SCGB2A1O75556 95 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 C10orf113Q5VZT2 155 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 LINC00305Q7Z4B0 112 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 ARL2-SNX15V9GYD0 113 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 TAX1BP3O14907 124 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 UBE2G1P62253 170 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 C4orf3Q8WVX3 66 aa11.87□□□□□ -0.51
SHMT2-202ENST00000414700 CHTOPQ9Y3Y2 248 aaKnown RBP11.87□□□□□ -0.51
SHMT2-202ENST00000414700 SMIM27A0A1W2PRY6 76 aa11.86□□□□□ -0.51
SHMT2-202ENST00000414700 OR11H1Q8NG94 326 aa11.86□□□□□ -0.51
SHMT2-202ENST00000414700 WFDC12Q8WWY7 111 aa11.86□□□□□ -0.51
SHMT2-202ENST00000414700 K7ERU9 68 aa11.86□□□□□ -0.51
SHMT2-202ENST00000414700 ISLRO14498 428 aa11.86□□□□□ -0.51
SHMT2-202ENST00000414700 MRPL54Q6P161 138 aaKnown RBP11.86□□□□□ -0.51
SHMT2-202ENST00000414700 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
SHMT2-202ENST00000414700 SMIM12Q96EX1 92 aa11.86□□□□□ -0.51
SHMT2-202ENST00000414700 SLC25A39Q9BZJ4 359 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-202ENST00000414700 HIGD1AQ9Y241 93 aa11.86□□□□□ -0.51
SHMT2-202ENST00000414700 IGHV3OR16-13A0A075B7E8 117 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 IGHV3-49A0A0A0MS15 119 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 IGHV3-74A0A0B4J1X5 117 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 HELTA6NFD8 242 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 ADARB2-AS1A8MUL3 147 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 M0R2Z0 102 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 HSBP1O75506 76 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 EDN2P20800 178 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 TCL1AP56279 114 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 EBLN2Q6P2I7 272 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 RNASE7Q9H1E1 156 aaKnown RBP11.85□□□□□ -0.51
SHMT2-202ENST00000414700 ST20Q9HBF5 79 aa11.85□□□□□ -0.51
SHMT2-202ENST00000414700 TSSC4Q9Y5U2 329 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-202ENST00000414700 IZUMO1RA6ND01 250 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms