RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 HBZP02008 142 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 SUB1P53999 127 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNHG3-201ENST00000413987 FBXL19-AS1Q494R0 122 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 SPINK9Q5DT21 86 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 PHLDA1Q8WV24 401 aaPredicted RBP7.39□□□□□ -1.23
SNHG3-201ENST00000413987 C19orf24Q9BVV8 132 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 DOCK11Q5JSL3 2073 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 TRAV8-6A0A0B4J262 113 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 A0A0G2JLM5 398 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 TMEM30CPA0ZSE6 113 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 E7EQL1 145 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 FNDC10F2Z333 226 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 SMIM17P0DL12 118 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 MGST1P10620 155 aaKnown RBP7.38□□□□□ -1.23
SNHG3-201ENST00000413987 SAA4P35542 130 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 EMP1P54849 157 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 MFAP2P55001 183 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
SNHG3-201ENST00000413987 OR13A1Q8NGR1 328 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 OR2T6Q8NHC8 308 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 POLQO75417 2590 aa7.38□□□□□ -1.23
SNHG3-201ENST00000413987 A0A1B0GX51 115 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 A0A1W2PPR1 153 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 DEFB108AA8MXU0 73 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 VDAC2P45880 294 aaPredicted RBP7.37□□□□□ -1.23
SNHG3-201ENST00000413987 BRWD1-AS2P59051 145 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 TAS2R45P59539 299 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 UFSP1Q6NVU6 142 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 MRPL55Q7Z7F7 128 aaKnown RBP7.37□□□□□ -1.23
SNHG3-201ENST00000413987 C1orf158Q8N1D5 194 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 IGF2BP2-AS1Q96M15 143 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 NDFIP1Q9BT67 221 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 PLEKHA3Q9HB20 300 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 C7orf71A4D174 169 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 LEPROTL1O95214 131 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 IGLV2-8P01709 118 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 COL8A1P27658 744 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 ZNF146Q15072 292 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 PAPPA-AS1Q5QFB9 102 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 FAM120AOSQ5T036 256 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 UBALD1Q8TB05 177 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 RTL8AQ9BWD3 113 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 MRPL16Q9NX20 251 aaKnown RBP7.37□□□□□ -1.23
SNHG3-201ENST00000413987 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 SPG11Q96JI7 2443 aa7.37□□□□□ -1.23
SNHG3-201ENST00000413987 LOC102724200A0A096LPH7 203 aaPredicted RBP7.36□□□□□ -1.23
SNHG3-201ENST00000413987 A6NDN8 102 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 H3BRM9 83 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 IGHV3-13P01766 116 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 ERVK-16P61578 105 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 CCL8P80075 99 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 FAM201AQ5SY85 155 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 SPATA31B1PQ5VZV4 182 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 SLC35E4Q6ICL7 350 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 C11orf53Q8IXP5 236 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 MBD6Q96DN6 1003 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 ABCA12Q86UK0 2595 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 IGLV3-9A0A075B6K5 115 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 FAM236DA0A1B0GTK5 79 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 hDV102S1A0JD36 115 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 C9orf118A6NHY6 69 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 TIMM23O14925 209 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 OR9G9P0C7N8 305 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 FAM236CP0DP71 79 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 GATA2P23769 480 aaPredicted RBP7.36□□□□□ -1.23
SNHG3-201ENST00000413987 APOC4P55056 127 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 MLANAQ16655 118 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 NEGR1Q7Z3B1 354 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 SPATA12Q7Z6I5 190 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 BPIFA4PQ86YQ2 179 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 NUP37Q8NFH4 326 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 OR5A1Q8NGJ0 315 aa7.36□□□□□ -1.23
SNHG3-201ENST00000413987 SOX21Q9Y651 276 aaPredicted RBP7.36□□□□□ -1.23
SNHG3-201ENST00000413987 ZFHX3Q15911 3703 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 ARFGEF3Q5TH69 2177 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 USF3Q68DE3 2245 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 NCBP2LA6PVI3 153 aaKnown RBP7.35□□□□□ -1.23
SNHG3-201ENST00000413987 C12orf77C9JDV5 145 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 K7EP34 96 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 RPL7P18124 248 aaKnown RBP7.35□□□□□ -1.23
SNHG3-201ENST00000413987 GPR6P46095 362 aaPredicted RBP7.35□□□□□ -1.23
SNHG3-201ENST00000413987 RIGQ13278 110 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 PVRIGQ6DKI7 326 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 GOLT1AQ6ZVE7 132 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 MIR17HGQ75NE6 70 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 ITLN1Q8WWA0 313 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 LY6HO94772 140 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 IGHV1-46P01743 117 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 COX8AP10176 69 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 ORM2P19652 201 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 C5orf17Q8NAS9 161 aa7.35□□□□□ -1.23
SNHG3-201ENST00000413987 IGHV3OR15-7A0A075B7D8 119 aa7.34□□□□□ -1.23
SNHG3-201ENST00000413987 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
SNHG3-201ENST00000413987 LINC00473A8K010 186 aa7.34□□□□□ -1.23
SNHG3-201ENST00000413987 GDF5OSQ5U4N7 250 aa7.34□□□□□ -1.23
SNHG3-201ENST00000413987 NABP2Q9BQ15 211 aa7.34□□□□□ -1.23
SNHG3-201ENST00000413987 KIR2DS2P43631 304 aa7.33□□□□□ -1.24
SNHG3-201ENST00000413987 HBBP68871 147 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms