RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 VGLL1Q99990 258 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 NDUFAF3Q9BU61 184 aa10.51□□□□□ -0.73
LIMS4-201ENST00000413601 FXYD6-FXYD2A0A087WZ82 144 aa10.5□□□□□ -0.73
LIMS4-201ENST00000413601 A0A1W2PPV4 95 aa10.5□□□□□ -0.73
LIMS4-201ENST00000413601 INO80EQ8NBZ0 244 aaPredicted RBP10.5□□□□□ -0.73
LIMS4-201ENST00000413601 OR10G4Q8NGN3 311 aa10.5□□□□□ -0.73
LIMS4-201ENST00000413601 OR10G9Q8NGN4 311 aa10.5□□□□□ -0.73
LIMS4-201ENST00000413601 OR10G7Q8NGN6 311 aa10.5□□□□□ -0.73
LIMS4-201ENST00000413601 OR2T35Q8NGX2 323 aa10.5□□□□□ -0.73
LIMS4-201ENST00000413601 RNASE8Q8TDE3 154 aaKnown RBP10.5□□□□□ -0.73
LIMS4-201ENST00000413601 TMEM263Q8WUH6 116 aaKnown RBP10.5□□□□□ -0.73
LIMS4-201ENST00000413601 FAM19A4Q96LR4 140 aa10.5□□□□□ -0.73
LIMS4-201ENST00000413601 Q9H3A6 140 aa10.5□□□□□ -0.73
LIMS4-201ENST00000413601 C7orf71A4D174 169 aa10.49□□□□□ -0.73
LIMS4-201ENST00000413601 RNF222A6NCQ9 220 aa10.49□□□□□ -0.73
LIMS4-201ENST00000413601 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
LIMS4-201ENST00000413601 SLC25A5P05141 298 aaKnown RBP10.49□□□□□ -0.73
LIMS4-201ENST00000413601 CD300CQ08708 224 aa10.49□□□□□ -0.73
LIMS4-201ENST00000413601 TMEM78Q5T7P6 136 aa10.49□□□□□ -0.73
LIMS4-201ENST00000413601 ZNF493Q6ZR52 646 aa10.49□□□□□ -0.73
LIMS4-201ENST00000413601 CCDC28AQ8IWP9 274 aa10.49□□□□□ -0.73
LIMS4-201ENST00000413601 LYPD1Q8N2G4 141 aa10.49□□□□□ -0.73
LIMS4-201ENST00000413601 TIMM8BQ9Y5J9 83 aaPredicted RBP10.49□□□□□ -0.73
LIMS4-201ENST00000413601 KLLNB2CW77 178 aa10.48□□□□□ -0.73
LIMS4-201ENST00000413601 GPX1P07203 203 aa10.48□□□□□ -0.73
LIMS4-201ENST00000413601 ATP6V0CP27449 155 aa10.48□□□□□ -0.73
LIMS4-201ENST00000413601 RNASE4P34096 147 aaKnown RBP10.48□□□□□ -0.73
LIMS4-201ENST00000413601 CSN1S1P47710 185 aa10.48□□□□□ -0.73
LIMS4-201ENST00000413601 BTN1A1Q13410 526 aa10.48□□□□□ -0.73
LIMS4-201ENST00000413601 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
LIMS4-201ENST00000413601 SH3BGRL3Q9H299 93 aa10.48□□□□□ -0.73
LIMS4-201ENST00000413601 NOP10Q9NPE3 64 aaKnown RBP10.48□□□□□ -0.73
LIMS4-201ENST00000413601 ZNF492Q9P255 531 aa10.48□□□□□ -0.73
LIMS4-201ENST00000413601 TNFSF18Q9UNG2 199 aa10.48□□□□□ -0.73
LIMS4-201ENST00000413601 G3V3Q6 166 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 ZNF324O75467 553 aaPredicted RBP10.47□□□□□ -0.73
LIMS4-201ENST00000413601 CRISP2P16562 243 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 PQLC2Q6ZP29 291 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 ZFAND2AQ8N6M9 145 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 OR2G3Q8NGZ4 309 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 Q8TAT8 98 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 FAM210BQ96KR6 192 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 HYLS1Q96M11 299 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 PYGO2Q9BRQ0 406 aa10.47□□□□□ -0.73
LIMS4-201ENST00000413601 CDC34P49427 236 aaPredicted RBP10.46□□□□□ -0.73
LIMS4-201ENST00000413601 ZNF138P52744 262 aa10.46□□□□□ -0.73
LIMS4-201ENST00000413601 PRR9Q5T870 116 aa10.46□□□□□ -0.73
LIMS4-201ENST00000413601 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.73
LIMS4-201ENST00000413601 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.73
LIMS4-201ENST00000413601 BORCS7-ASMTA0A0B4J1R7 106 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 PGPA6NDG6 321 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 CBY3A6NI87 242 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 SNURFLB1AK76 121 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 DIRC3C9JPN6 131 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 NMBP08949 121 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 ARL14EPLP0DKL9 152 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 P0DMU3 169 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 FAM231AP0DMU4 169 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 FAM231CP0DMU5 169 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 SERF2P84101 59 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 Q6ZQT7 251 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 RXFP4Q8TDU9 374 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 RAB24Q969Q5 203 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 OTORQ9NRC9 128 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 RPH3ALQ9UNE2 315 aa10.45□□□□□ -0.74
LIMS4-201ENST00000413601 F5H768 121 aa10.44□□□□□ -0.74
LIMS4-201ENST00000413601 SMLR1H3BR10 107 aa10.44□□□□□ -0.74
LIMS4-201ENST00000413601 MBP02144 154 aa10.44□□□□□ -0.74
LIMS4-201ENST00000413601 ATP5G1P05496 136 aa10.44□□□□□ -0.74
LIMS4-201ENST00000413601 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
LIMS4-201ENST00000413601 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
LIMS4-201ENST00000413601 ATP5G3P48201 142 aa10.44□□□□□ -0.74
LIMS4-201ENST00000413601 NACAE9PAV3 2078 aa10.43□□□□□ -0.74
LIMS4-201ENST00000413601 ARPC5O15511 151 aa10.43□□□□□ -0.74
LIMS4-201ENST00000413601 FAM74A1Q5RGS3 127 aa10.43□□□□□ -0.74
LIMS4-201ENST00000413601 EIF4E3Q8N5X7 224 aaKnown RBP10.43□□□□□ -0.74
LIMS4-201ENST00000413601 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
LIMS4-201ENST00000413601 CMTM2Q8TAZ6 248 aa10.43□□□□□ -0.74
LIMS4-201ENST00000413601 GNPNAT1Q96EK6 184 aaPredicted RBP10.43□□□□□ -0.74
LIMS4-201ENST00000413601 LINC00467Q9BRT7 94 aa10.43□□□□□ -0.74
LIMS4-201ENST00000413601 GSN-AS1Q9NRJ2 163 aa10.43□□□□□ -0.74
LIMS4-201ENST00000413601 KMT2AQ03164 3969 aa10.43□□□□□ -0.74
LIMS4-201ENST00000413601 TRBV7-9A0A0J9YWB2 115 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 GAGE12BA1L429 117 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 RGS13O14921 159 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 GAGE7O76087 117 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 GAGE12FP0CL80 117 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 GAGE12GP0CL81 117 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 GAGE12IP0CL82 117 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 GCHFRP30047 84 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 GOLT1AQ6ZVE7 132 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 SSX7Q7RTT5 188 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 LINC00612Q8N6U2 182 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 ACTR3CQ9C0K3 210 aaPredicted RBP10.42□□□□□ -0.74
LIMS4-201ENST00000413601 TP53TG3Q9ULZ0 132 aa10.42□□□□□ -0.74
LIMS4-201ENST00000413601 GNG5P63218 68 aa10.41□□□□□ -0.74
LIMS4-201ENST00000413601 DAZ2Q13117 558 aaKnown RBP10.41□□□□□ -0.74
LIMS4-201ENST00000413601 ANXA2RQ3ZCQ2 193 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms