RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 MBPP02686 304 aaPredicted RBP8.22□□□□□ -1.09
LIMS2-210ENST00000413578 SMR3BP02814 79 aaPredicted RBP8.22□□□□□ -1.09
LIMS2-210ENST00000413578 CAMLGP49069 296 aa8.22□□□□□ -1.09
LIMS2-210ENST00000413578 SLAQ13239 276 aa8.22□□□□□ -1.09
LIMS2-210ENST00000413578 IAH1Q2TAA2 248 aaPredicted RBP8.22□□□□□ -1.09
LIMS2-210ENST00000413578 MIC13Q5XKP0 118 aa8.22□□□□□ -1.09
LIMS2-210ENST00000413578 ZFAND2AQ8N6M9 145 aa8.22□□□□□ -1.09
LIMS2-210ENST00000413578 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
LIMS2-210ENST00000413578 AGPAT4-IT1Q9H0P7 198 aa8.22□□□□□ -1.09
LIMS2-210ENST00000413578 C11orf1Q9H5F2 150 aa8.22□□□□□ -1.09
LIMS2-210ENST00000413578 SCGB1D2O95969 90 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 IFNA5P01569 189 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 IGHV3-53P01767 116 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 NMBP08949 121 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 GCSHP23434 173 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
LIMS2-210ENST00000413578 PRR9Q5T870 116 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 Q6ZQT7 251 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 MRPL16Q9NX20 251 aaKnown RBP8.21□□□□□ -1.1
LIMS2-210ENST00000413578 MSRB1Q9NZV6 116 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 TMEM14CQ9P0S9 112 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 TP53TG3Q9ULZ0 132 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 LY96Q9Y6Y9 160 aa8.21□□□□□ -1.1
LIMS2-210ENST00000413578 MPDU1O75352 247 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 BTCP35070 178 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 PDE6HQ13956 83 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 Q6ZRG5 221 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 C9orf47Q6ZRZ4 202 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 NEGR1Q7Z3B1 354 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 NRARPQ7Z6K4 114 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 WFDC10BQ8IUB3 73 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 MITD1Q8WV92 249 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 C8orf49Q96NF6 230 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 MRPL32Q9BYC8 188 aaKnown RBP8.2□□□□□ -1.1
LIMS2-210ENST00000413578 SRRQ9GZT4 340 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 HHLA3Q9XRX5 114 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 PRELID1Q9Y255 219 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 WDR83OSQ9Y284 106 aa8.2□□□□□ -1.1
LIMS2-210ENST00000413578 TRAV9-2A0A087WT02 112 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 NAP1L6A6NFF2 107 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 PRAF2O60831 178 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 RNASE4P34096 147 aaKnown RBP8.19□□□□□ -1.1
LIMS2-210ENST00000413578 RPL29P47914 159 aaKnown RBP8.19□□□□□ -1.1
LIMS2-210ENST00000413578 HAMPP81172 84 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 IQCF2Q8IXL9 164 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 OR1L4Q8NGR5 311 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 CHAC2Q8WUX2 184 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 TMEM70Q9BUB7 260 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 GSKIPQ9P0R6 139 aa8.19□□□□□ -1.1
LIMS2-210ENST00000413578 IGHV1OR15-1A0A075B7D0 117 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 LRCOL1A6NCL2 159 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 K7EQD1 137 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 HIST1H1EP10412 219 aaKnown RBP8.18□□□□□ -1.1
LIMS2-210ENST00000413578 RAB31Q13636 194 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 BAK1Q16611 211 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 Q6ZSN1 163 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 EXOC3-AS1Q8N2X6 119 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 PFDN5Q99471 154 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 SLC39A9Q9NUM3 307 aa8.18□□□□□ -1.1
LIMS2-210ENST00000413578 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
LIMS2-210ENST00000413578 IGKV2-40A0A087WW87 121 aaPredicted RBP8.17□□□□□ -1.1
LIMS2-210ENST00000413578 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
LIMS2-210ENST00000413578 RGS13O14921 159 aa8.17□□□□□ -1.1
LIMS2-210ENST00000413578 NOL3O60936 208 aaKnown RBP8.17□□□□□ -1.1
LIMS2-210ENST00000413578 IGKV2D-40P01614 121 aaPredicted RBP8.17□□□□□ -1.1
LIMS2-210ENST00000413578 GPX1P07203 203 aa8.17□□□□□ -1.1
LIMS2-210ENST00000413578 PYYP10082 97 aa8.17□□□□□ -1.1
LIMS2-210ENST00000413578 C12orf45Q8N5I9 185 aaPredicted RBP8.17□□□□□ -1.1
LIMS2-210ENST00000413578 ZNF479Q96JC4 524 aa8.17□□□□□ -1.1
LIMS2-210ENST00000413578 UQCC1Q9NVA1 299 aa8.17□□□□□ -1.1
LIMS2-210ENST00000413578 ZNF492Q9P255 531 aa8.17□□□□□ -1.1
LIMS2-210ENST00000413578 TRBV7-9A0A0J9YWB2 115 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 CST7O76096 145 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 SFTA3P0C7M3 94 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 EVI2AP22794 236 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 SRIP30626 198 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 S100A5P33763 92 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 OR10G4Q8NGN3 311 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 NTN5Q8WTR8 489 aaPredicted RBP8.16□□□□□ -1.1
LIMS2-210ENST00000413578 RASL10AQ92737 203 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 FAM167A-AS1Q96KT0 104 aa8.16□□□□□ -1.1
LIMS2-210ENST00000413578 SDHCQ99643 169 aaPredicted RBP8.16□□□□□ -1.1
LIMS2-210ENST00000413578 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 FAM24AA6NFZ4 105 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 E5RGE8 158 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 CCSO14618 274 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 GYPEP15421 78 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 CAV2P51636 162 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 ZNF415Q09FC8 603 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 C10orf126Q8N4M7 172 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 ARPC5LQ9BPX5 153 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 SLC25A2Q9BXI2 301 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 C20orf85Q9H1P6 137 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 TIMM9Q9Y5J7 89 aa8.15□□□□□ -1.1
LIMS2-210ENST00000413578 IGLV5-52A0A0A0MRZ9 124 aa8.14□□□□□ -1.11
LIMS2-210ENST00000413578 TRGV4A0A0C4DH28 118 aa8.14□□□□□ -1.11
LIMS2-210ENST00000413578 UBE2L5PA0A1B0GUS4 154 aa8.14□□□□□ -1.11
LIMS2-210ENST00000413578 L7N2F9 121 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms