RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 RPH3ALQ9UNE2 315 aa11.41□□□□□ -0.58
PUDP-202ENST00000412827 TRAV34A0A0B4J273 112 aa11.4□□□□□ -0.59
PUDP-202ENST00000412827 K7EN84 100 aa11.4□□□□□ -0.59
PUDP-202ENST00000412827 S100PP25815 95 aa11.4□□□□□ -0.59
PUDP-202ENST00000412827 LENEPQ9Y5L5 61 aa11.4□□□□□ -0.59
PUDP-202ENST00000412827 TRAV9-1A0A075B6T8 112 aa11.39□□□□□ -0.59
PUDP-202ENST00000412827 TRAV25A0A0B4J276 109 aa11.39□□□□□ -0.59
PUDP-202ENST00000412827 PGPEP1LA6NFU8 196 aa11.39□□□□□ -0.59
PUDP-202ENST00000412827 ERVFC1-1P60608 527 aa11.39□□□□□ -0.59
PUDP-202ENST00000412827 RPL11P62913 178 aaKnown RBP11.39□□□□□ -0.59
PUDP-202ENST00000412827 C9orf47Q6ZRZ4 202 aa11.39□□□□□ -0.59
PUDP-202ENST00000412827 NDFIP1Q9BT67 221 aa11.39□□□□□ -0.59
PUDP-202ENST00000412827 TRBV7-9A0A0J9YWB2 115 aa11.38□□□□□ -0.59
PUDP-202ENST00000412827 MGST1P10620 155 aaKnown RBP11.38□□□□□ -0.59
PUDP-202ENST00000412827 IBA57Q5T440 356 aaKnown RBP11.38□□□□□ -0.59
PUDP-202ENST00000412827 KCNIP4Q6PIL6 250 aa11.38□□□□□ -0.59
PUDP-202ENST00000412827 PRNTQ86SH4 94 aa11.38□□□□□ -0.59
PUDP-202ENST00000412827 OR2K2Q8NGT1 345 aa11.38□□□□□ -0.59
PUDP-202ENST00000412827 DCANP1Q8TF63 244 aa11.38□□□□□ -0.59
PUDP-202ENST00000412827 LINC00477Q96M19 166 aa11.38□□□□□ -0.59
PUDP-202ENST00000412827 YPEL4Q96NS1 127 aa11.38□□□□□ -0.59
PUDP-202ENST00000412827 TRBV24-1A0A075B6N3 115 aa11.37□□□□□ -0.59
PUDP-202ENST00000412827 COLCA2A8K830 154 aa11.37□□□□□ -0.59
PUDP-202ENST00000412827 CSN3P07498 182 aa11.37□□□□□ -0.59
PUDP-202ENST00000412827 IGLL1P15814 213 aa11.37□□□□□ -0.59
PUDP-202ENST00000412827 SNRPD3P62318 126 aaKnown RBP11.37□□□□□ -0.59
PUDP-202ENST00000412827 RPL19P84098 196 aaKnown RBP11.37□□□□□ -0.59
PUDP-202ENST00000412827 CT83Q5H943 113 aa11.37□□□□□ -0.59
PUDP-202ENST00000412827 K7EQG2 157 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 WIPF1O43516 503 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 PFN1P07737 140 aaKnown RBP11.36□□□□□ -0.59
PUDP-202ENST00000412827 CT45A10P0DMU9 189 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 ELOBQ15370 118 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 TMEM78Q5T7P6 136 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 OR4B1Q8NGF8 309 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 DAZAP1Q96EP5 407 aaKnown RBP11.36□□□□□ -0.59
PUDP-202ENST00000412827 PRR25Q96S07 402 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 PYGO2Q9BRQ0 406 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 MS4A6AQ9H2W1 248 aa11.36□□□□□ -0.59
PUDP-202ENST00000412827 AURKAIP1Q9NWT8 199 aaPredicted RBP11.36□□□□□ -0.59
PUDP-202ENST00000412827 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 C19orf71A6NCJ1 209 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 IGLV1-51P01701 117 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 HLA-DMBP28068 263 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 OR5I1Q13606 314 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 RNF182Q8N6D2 247 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 OR10J6PQ8NGY7 276 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 IL36BQ9NZH7 164 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 V9GYV3 84 aa11.35□□□□□ -0.59
PUDP-202ENST00000412827 IGKV2-40A0A087WW87 121 aaPredicted RBP11.34□□□□□ -0.59
PUDP-202ENST00000412827 FAM231BA6NCW3 169 aa11.34□□□□□ -0.59
PUDP-202ENST00000412827 ZNF705FA8MVS1 300 aaPredicted RBP11.34□□□□□ -0.59
PUDP-202ENST00000412827 NPIPB6E9PJ23 425 aa11.34□□□□□ -0.59
PUDP-202ENST00000412827 GATCO43716 136 aaKnown RBP11.34□□□□□ -0.59
PUDP-202ENST00000412827 IGKV2D-40P01614 121 aaPredicted RBP11.34□□□□□ -0.59
PUDP-202ENST00000412827 ZNF138P52744 262 aa11.34□□□□□ -0.59
PUDP-202ENST00000412827 IGFL4Q6B9Z1 124 aa11.34□□□□□ -0.59
PUDP-202ENST00000412827 RBPMS2Q6ZRY4 209 aaKnown RBP11.34□□□□□ -0.59
PUDP-202ENST00000412827 GBGT1Q8N5D6 347 aa11.34□□□□□ -0.59
PUDP-202ENST00000412827 FAM24BQ8N5W8 94 aa11.34□□□□□ -0.59
PUDP-202ENST00000412827 NUDT10Q8NFP7 164 aa11.34□□□□□ -0.59
PUDP-202ENST00000412827 NUDT11Q96G61 164 aa11.34□□□□□ -0.59
PUDP-202ENST00000412827 DEFB114Q30KQ6 69 aa11.33□□□□□ -0.6
PUDP-202ENST00000412827 SMUG1Q53HV7 270 aa11.33□□□□□ -0.6
PUDP-202ENST00000412827 SAMD5Q5TGI4 173 aa11.33□□□□□ -0.6
PUDP-202ENST00000412827 SGK494Q96LW2 274 aa11.33□□□□□ -0.6
PUDP-202ENST00000412827 VGLL1Q99990 258 aa11.33□□□□□ -0.6
PUDP-202ENST00000412827 ZNF705GA8MUZ8 300 aaPredicted RBP11.32□□□□□ -0.6
PUDP-202ENST00000412827 A8MWL6 223 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 P01737 135 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 EDN2P20800 178 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 NHLRC2Q8NBF2 726 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 C20orf173Q96LM9 149 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 SPAG8Q99932 426 aaPredicted RBP11.32□□□□□ -0.6
PUDP-202ENST00000412827 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
PUDP-202ENST00000412827 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
PUDP-202ENST00000412827 TYMSP04818 313 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 RAB5AP20339 215 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 CMC4P56277 68 aaPredicted RBP11.31□□□□□ -0.6
PUDP-202ENST00000412827 CD300EQ496F6 205 aaPredicted RBP11.31□□□□□ -0.6
PUDP-202ENST00000412827 OXLD1Q5BKU9 147 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.31□□□□□ -0.6
PUDP-202ENST00000412827 ZC2HC1AQ96GY0 325 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 ODF3Q96PU9 254 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 ASCL2Q99929 193 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
PUDP-202ENST00000412827 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
PUDP-202ENST00000412827 MGAM2Q2M2H8 2515 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 VWFP04275 2813 aa11.31□□□□□ -0.6
PUDP-202ENST00000412827 SMIM27A0A1W2PRY6 76 aa11.3□□□□□ -0.6
PUDP-202ENST00000412827 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
PUDP-202ENST00000412827 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
PUDP-202ENST00000412827 COX19Q49B96 90 aa11.3□□□□□ -0.6
PUDP-202ENST00000412827 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms