RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 MRPL18Q9H0U6 180 aaKnown RBP5.56□□□□□ -1.52
CPSF4-202ENST00000412686 TMPRSS5Q9H3S3 457 aa5.56□□□□□ -1.52
CPSF4-202ENST00000412686 PPP1R14DQ9NXH3 145 aa5.56□□□□□ -1.52
CPSF4-202ENST00000412686 CELA1Q9UNI1 258 aa5.56□□□□□ -1.52
CPSF4-202ENST00000412686 PRELID1Q9Y255 219 aa5.56□□□□□ -1.52
CPSF4-202ENST00000412686 CTXND1A0A1B0GTU2 59 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 ZNF705GA8MUZ8 300 aaPredicted RBP5.55□□□□□ -1.52
CPSF4-202ENST00000412686 INSP01308 110 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 MIFP14174 115 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 CDKN1BP46527 198 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 NKX2-5P52952 324 aaPredicted RBP5.55□□□□□ -1.52
CPSF4-202ENST00000412686 EMP1P54849 157 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 NANOS2P60321 138 aaKnown RBP5.55□□□□□ -1.52
CPSF4-202ENST00000412686 PRR9Q5T870 116 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 Q6ZQT7 251 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 C9orf62Q8N4C0 152 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 TMEM208Q9BTX3 173 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 C11orf68Q9H3H3 251 aaKnown RBP5.55□□□□□ -1.52
CPSF4-202ENST00000412686 OTORQ9NRC9 128 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 GOLT1BQ9Y3E0 138 aa5.55□□□□□ -1.52
CPSF4-202ENST00000412686 NBEAL2Q6ZNJ1 2754 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 TRAV8-1A0A0A6YYK1 113 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 A0A1B0GV50 99 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 MAP1LC3B2A6NCE7 125 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 GGTLC3B5MD39 225 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 DIRC3C9JPN6 131 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 C3orf84H3BNL1 204 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 CXorf1O96002 111 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 AMBPP02760 352 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 SEC11BP0C7V7 166 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 TPT1P13693 172 aaKnown RBP5.54□□□□□ -1.52
CPSF4-202ENST00000412686 HTN1P15515 57 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 AZU1P20160 251 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 UBE2G2P60604 165 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 BTN1A1Q13410 526 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 C9orf47Q6ZRZ4 202 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 LYPD1Q8N2G4 141 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 SUN5Q8TC36 379 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 FAM19A4Q96LR4 140 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 SGK494Q96LW2 274 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 LINC01587Q99440 93 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 MAP1LC3BQ9GZQ8 125 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 ZNF492Q9P255 531 aa5.54□□□□□ -1.52
CPSF4-202ENST00000412686 YTHDF2Q9Y5A9 579 aaKnown RBP5.54□□□□□ -1.52
CPSF4-202ENST00000412686 TRAV12-3A0A0B4J271 114 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 LOC102723971A0A1B0GUV8 181 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 CXorf65A6NEN9 183 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 KLLNB2CW77 178 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 HBE1P02100 147 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 SLC25A5P05141 298 aaKnown RBP5.53□□□□□ -1.52
CPSF4-202ENST00000412686 LEPP41159 167 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 CSN1S1P47710 185 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 RRN3P1Q2M238 152 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 ZFP69Q49AA0 526 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 GOLT1AQ6ZVE7 132 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 ZFAND2AQ8N6M9 145 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 STOML3Q8TAV4 291 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 C11orf45Q8TAV5 145 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 CMTM2Q8TAZ6 248 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 FAM213BQ8TBF2 198 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 ODF3Q96PU9 254 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 NEU1Q99519 415 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 TMEM167BQ9NRX6 74 aa5.53□□□□□ -1.52
CPSF4-202ENST00000412686 STAB2Q8WWQ8 2551 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 PLAC8L1A1L4L8 177 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 C7orf71A4D174 169 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 SMIM9A6NGZ8 99 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 TCRAP04437 139 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 CRISP2P16562 243 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 TSPOP30536 169 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 RNASE4P34096 147 aaKnown RBP5.52□□□□□ -1.53
CPSF4-202ENST00000412686 ZNF138P52744 262 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 SUMO1P63165 101 aaKnown RBP5.52□□□□□ -1.53
CPSF4-202ENST00000412686 C12orf74Q32Q52 190 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 FAM74A1Q5RGS3 127 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 TMEM78Q5T7P6 136 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 FAM222AQ5U5X8 452 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 Q6ZTC4 211 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 RXFP4Q8TDU9 374 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 TVP23CQ96ET8 276 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 LINC00477Q96M19 166 aa5.52□□□□□ -1.53
CPSF4-202ENST00000412686 SSBP4Q9BWG4 385 aaPredicted RBP5.52□□□□□ -1.53
CPSF4-202ENST00000412686 RBAKDNA6NC62 111 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 FAM74A7A6NL05 159 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 UMAD1C9J7I0 102 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 F6UZH7 168 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 H7BYZ3 331 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 EIF4EBP3O60516 100 aaPredicted RBP5.51□□□□□ -1.53
CPSF4-202ENST00000412686 GPX1P07203 203 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 ATP5G3P48201 142 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 TAS2R60P59551 318 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 EIF5AP63241 154 aaKnown RBP5.51□□□□□ -1.53
CPSF4-202ENST00000412686 SLC51BQ86UW2 128 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 C5orf17Q8NAS9 161 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 SFT2D1Q8WV19 159 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 PHLDA1Q8WV24 401 aaPredicted RBP5.51□□□□□ -1.53
CPSF4-202ENST00000412686 MBD3L1Q8WWY6 194 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 LINC00479Q96M42 142 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 DKK2Q9UBU2 259 aa5.51□□□□□ -1.53
CPSF4-202ENST00000412686 STARD9Q9P2P6 4700 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms