RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 DSCR9P59020 149 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 SOX21Q9Y651 276 aaPredicted RBP8.88□□□□□ -0.99
PTPRF-204ENST00000412568 IGHV4-38-2P0DP08 117 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 UBE2V1Q13404 147 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 DAZAP2Q15038 168 aaPredicted RBP8.87□□□□□ -0.99
PTPRF-204ENST00000412568 RAX2Q96IS3 184 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 IGLC1P0CG04 106 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 TMEM170BQ5T4T1 132 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 ORAOV1Q8WV07 137 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 SLC50A1Q9BRV3 221 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 RHPN1-AS1Q9BWJ2 59 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 MRPL36Q9P0J6 103 aaKnown RBP8.87□□□□□ -0.99
PTPRF-204ENST00000412568 ASIPP42127 132 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 SPOCK3Q9BQ16 436 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 SLC25A2Q9BXI2 301 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 TOMM40O96008 361 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 CR1LQ2VPA4 569 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 SHANK2-AS3Q9BTD1 123 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 ST20Q9HBF5 79 aa8.87□□□□□ -0.99
PTPRF-204ENST00000412568 SLC25A16P16260 332 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 HOXB4P17483 251 aaPredicted RBP8.86□□□□□ -0.99
PTPRF-204ENST00000412568 BLCAPP62952 87 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 IGKV1OR2-108A0A075B7D4 117 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 IGKV3OR2-268A0A0C4DH90 116 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 FAM181BA6NEQ2 426 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 KLF2Q9Y5W3 355 aaPredicted RBP8.86□□□□□ -0.99
PTPRF-204ENST00000412568 SNCGO76070 127 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 NDUFA3O95167 84 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 HLA-DMBP28068 263 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 Q8N7P7 452 aa8.86□□□□□ -0.99
PTPRF-204ENST00000412568 LGALS3P17931 250 aaKnown RBP8.85□□□□□ -0.99
PTPRF-204ENST00000412568 DUX3Q96PT4 197 aa8.85□□□□□ -0.99
PTPRF-204ENST00000412568 NDUFS8O00217 210 aa8.85□□□□□ -0.99
PTPRF-204ENST00000412568 IGHV4-59P01825 116 aa8.85□□□□□ -0.99
PTPRF-204ENST00000412568 Q6AWC8 147 aa8.85□□□□□ -0.99
PTPRF-204ENST00000412568 V9GYV3 84 aa8.85□□□□□ -0.99
PTPRF-204ENST00000412568 RRN3P1Q2M238 152 aa8.85□□□□□ -0.99
PTPRF-204ENST00000412568 K7EN84 100 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 ATP5LO75964 103 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 IGLV1-47P01700 117 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 TEX29Q8N6K0 151 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 IFI27L1Q96BM0 104 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 LINC01587Q99440 93 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 C20orf144Q9BQM9 153 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 HCFC1P51610 2035 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 TRBV7-1A0A0A6YYK4 115 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 CGB3P0DN86 165 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 CGB7P0DN87 165 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 C1orf122Q6ZSJ8 110 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 SYT8Q8NBV8 401 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 SMKR1H3BMG3 65 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 HBDP02042 147 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 LEPP41159 167 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 KLHL30-AS1Q8NEE0 82 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 C11orf52Q96A22 123 aa8.84□□□□□ -0.99
PTPRF-204ENST00000412568 TRAV12-3A0A0B4J271 114 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 P0C879 139 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 DEFB112Q30KQ8 113 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 ATP5L2Q7Z4Y8 100 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 FAM110DQ8TAY7 271 aaPredicted RBP8.83□□□□□ -1
PTPRF-204ENST00000412568 C8orf49Q96NF6 230 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 CENPVL3A0A0U1RRI6 287 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 SH2D1AO60880 128 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 PSG3Q16557 428 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 ATG2AQ2TAZ0 1938 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 SEC11AP67812 179 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 Q6ZWC4 215 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 ZNF491Q8N8L2 437 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 GAGE12BA1L429 117 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 ARMS2P0C7Q2 107 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 FXYD5Q96DB9 178 aa8.83□□□□□ -1
PTPRF-204ENST00000412568 TRBV19A0A075B6N1 114 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 Q86TA4 180 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 OR11H6Q8NGC7 330 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 KIR2DL4Q99706 377 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 SIGMAR1Q99720 223 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 GTSF1LQ9H1H1 148 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 MAP1AP78559 2803 aaPredicted RBP8.82□□□□□ -1
PTPRF-204ENST00000412568 IGHV3-73A0A0B4J1V6 119 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 A0A1B0GW15 77 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 IGKV1-17P01599 117 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 FBXL19-AS1Q494R0 122 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 TMEM75Q8N9X5 138 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 COX11Q9Y6N1 276 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 IGHV7-81A0A0B4J1V7 117 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 YPEL3P61236 119 aaPredicted RBP8.82□□□□□ -1
PTPRF-204ENST00000412568 TMEM249Q2WGJ8 235 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 AMN1Q8IY45 258 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 ZNF479Q96JC4 524 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 JMJD8Q96S16 334 aa8.82□□□□□ -1
PTPRF-204ENST00000412568 D6R8Y8 96 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 SYS1-DBNDD2H3BUS1 97 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 J3QKU1 62 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 SAMD5Q5TGI4 173 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 HIST2H2BCQ6DN03 193 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 PATE2Q6UY27 113 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 CHCHD1Q96BP2 118 aaKnown RBP8.81□□□□□ -1
PTPRF-204ENST00000412568 TRAV21A0A0B4J279 112 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms