RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
HDAC8-210ENST00000412342 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 KLLNB2CW77 178 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 DIRC3C9JPN6 131 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 CXorf1O96002 111 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 PRM2P04554 102 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 SLC25A5P05141 298 aaKnown RBP9.44□□□□□ -0.9
HDAC8-210ENST00000412342 CRISP2P16562 243 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 TSPOP30536 169 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 AKR1C8PQ5T2L2 129 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 ARL6IP6Q8N6S5 226 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 STOML3Q8TAV4 291 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 C11orf45Q8TAV5 145 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 C20orf144Q9BQM9 153 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 PPP1R14DQ9NXH3 145 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 ZNF492Q9P255 531 aa9.44□□□□□ -0.9
HDAC8-210ENST00000412342 LOC102723971A0A1B0GUV8 181 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 PLAC8L1A1L4L8 177 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 PGPA6NDG6 321 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 HBE1P02100 147 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 LEPP41159 167 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 FHITP49789 147 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 PMS2P11Q13670 270 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 PRR9Q5T870 116 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 ZFAND2AQ8N6M9 145 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 RXFP4Q8TDU9 374 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 HYLS1Q96M11 299 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 TMPRSS5Q9H3S3 457 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 TMEM167BQ9NRX6 74 aa9.43□□□□□ -0.9
HDAC8-210ENST00000412342 TRBV7-9A0A0J9YWB2 115 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 ZNF705GA8MUZ8 300 aaPredicted RBP9.42□□□□□ -0.9
HDAC8-210ENST00000412342 GGTLC3B5MD39 225 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 PFDN1O60925 122 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 NMBP08949 121 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 TPT1P13693 172 aaKnown RBP9.42□□□□□ -0.9
HDAC8-210ENST00000412342 AZU1P20160 251 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 CSN1S1P47710 185 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 ZNF138P52744 262 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 RRN3P1Q2M238 152 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 Q8TAT8 98 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 TMEM208Q9BTX3 173 aa9.42□□□□□ -0.9
HDAC8-210ENST00000412342 TMEM189A5PLL7 270 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 MAP1LC3B2A6NCE7 125 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 CXorf65A6NEN9 183 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 H7BYZ3 331 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 J3KRW8 73 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 FGF8P55075 233 aaPredicted RBP9.41□□□□□ -0.9
HDAC8-210ENST00000412342 TAS2R60P59551 318 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 GNG5P63218 68 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 EIF5AP63241 154 aaKnown RBP9.41□□□□□ -0.9
HDAC8-210ENST00000412342 BTN1A1Q13410 526 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 C12orf74Q32Q52 190 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 FAM74A1Q5RGS3 127 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 LCE2DQ5TA82 110 aaPredicted RBP9.41□□□□□ -0.9
HDAC8-210ENST00000412342 CEMP1Q6PRD7 247 aaPredicted RBP9.41□□□□□ -0.9
HDAC8-210ENST00000412342 C9orf62Q8N4C0 152 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 PHLDA1Q8WV24 401 aaPredicted RBP9.41□□□□□ -0.9
HDAC8-210ENST00000412342 TMED6Q8WW62 240 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 LINC01587Q99440 93 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 MAP1LC3BQ9GZQ8 125 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 DKK2Q9UBU2 259 aa9.41□□□□□ -0.9
HDAC8-210ENST00000412342 YTHDF2Q9Y5A9 579 aaKnown RBP9.41□□□□□ -0.9
HDAC8-210ENST00000412342 TRAV12-3A0A0B4J271 114 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 C7orf71A4D174 169 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 NUPR2A6NF83 97 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 UMAD1C9J7I0 102 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
HDAC8-210ENST00000412342 Q6ZTC4 211 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 C5orf17Q8NAS9 161 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 CMTM2Q8TAZ6 248 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 RNASE8Q8TDE3 154 aaKnown RBP9.4□□□□□ -0.9
HDAC8-210ENST00000412342 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.9
HDAC8-210ENST00000412342 VPS13DQ5THJ4 4388 aa9.4□□□□□ -0.91
HDAC8-210ENST00000412342 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 TCRAP04437 139 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 EMP1P54849 157 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 FAM222AQ5U5X8 452 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 Q6ZQT7 251 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 GOLT1AQ6ZVE7 132 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 ZNF767PQ75MW2 155 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 TVP23CQ96ET8 276 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 RPH3ALQ9UNE2 315 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 LENEPQ9Y5L5 61 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 HYDINQ4G0P3 5121 aa9.39□□□□□ -0.91
HDAC8-210ENST00000412342 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 IGLV2-11P01706 119 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 SUMO1P63165 101 aaKnown RBP9.38□□□□□ -0.91
HDAC8-210ENST00000412342 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 IQCF2Q8IXL9 164 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 FAM213BQ8TBF2 198 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 TMEM263Q8WUH6 116 aaKnown RBP9.38□□□□□ -0.91
HDAC8-210ENST00000412342 PYGO2Q9BRQ0 406 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 LINC00467Q9BRT7 94 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 EPDR1Q9UM22 224 aa9.38□□□□□ -0.91
HDAC8-210ENST00000412342 SERTM2A0A1B0GWG4 89 aa9.37□□□□□ -0.91
HDAC8-210ENST00000412342 GPX1P07203 203 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms