RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SMDT1Q9H4I9 107 aa12.19□□□□□ -0.46
TSPAN4-208ENST00000409531 NPIPB6E9PJ23 425 aa12.18□□□□□ -0.46
TSPAN4-208ENST00000409531 NUTF2P61970 127 aaKnown RBP12.18□□□□□ -0.46
TSPAN4-208ENST00000409531 PEA15Q15121 130 aa12.18□□□□□ -0.46
TSPAN4-208ENST00000409531 CITED4Q96RK1 184 aa12.18□□□□□ -0.46
TSPAN4-208ENST00000409531 PPP1R14DQ9NXH3 145 aa12.18□□□□□ -0.46
TSPAN4-208ENST00000409531 RYR3Q15413 4870 aa12.18□□□□□ -0.46
TSPAN4-208ENST00000409531 A8MTW9 85 aa12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 ZNF705DP0CH99 300 aaPredicted RBP12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 ZNF705BP0CI00 300 aaPredicted RBP12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 AKR1C3P42330 323 aa12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 TRPT1Q86TN4 253 aaKnown RBP12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 SBSPONQ8IVN8 264 aa12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 TMEM75Q8N9X5 138 aa12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 C11orf52Q96A22 123 aa12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 MED9Q9NWA0 146 aa12.17□□□□□ -0.46
TSPAN4-208ENST00000409531 COL7A1Q02388 2944 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 RAB19A4D1S5 217 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 TMEM250H0YL14 139 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 S100A9P06702 114 aaKnown RBP12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 UBE2G1P62253 170 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 FMC1Q96HJ9 113 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 ODF3Q96PU9 254 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 VGLL1Q99990 258 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
TSPAN4-208ENST00000409531 LOC102724200A0A096LPH7 203 aaPredicted RBP12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 TRBV7-9A0A0J9YWB2 115 aa12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 IGKV3-20P01619 116 aa12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 ZNF138P52744 262 aa12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 ERCC8Q13216 396 aa12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 MORN3Q6PF18 240 aaPredicted RBP12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 LENEPQ9Y5L5 61 aa12.15□□□□□ -0.46
TSPAN4-208ENST00000409531 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 RPL35AP18077 110 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 TSPOP30536 169 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 APOC4P55056 127 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 KLF12Q9Y4X4 402 aa12.14□□□□□ -0.47
TSPAN4-208ENST00000409531 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
TSPAN4-208ENST00000409531 TRAV8-1A0A0A6YYK1 113 aa12.13□□□□□ -0.47
TSPAN4-208ENST00000409531 AMBPP02760 352 aa12.13□□□□□ -0.47
TSPAN4-208ENST00000409531 LEPP41159 167 aa12.13□□□□□ -0.47
TSPAN4-208ENST00000409531 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
TSPAN4-208ENST00000409531 C1QTNF4Q9BXJ3 329 aa12.13□□□□□ -0.47
TSPAN4-208ENST00000409531 PSG8Q9UQ74 426 aa12.13□□□□□ -0.47
TSPAN4-208ENST00000409531 U3KQK5 164 aa12.13□□□□□ -0.47
TSPAN4-208ENST00000409531 TRBV6-1A0A0K0K1D8 114 aa12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 LINC00862A6NCI5 91 aa12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 TAS2R60P59551 318 aa12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 SAPCD1Q5SSQ6 148 aa12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 AMTNQ6UX39 209 aa12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 LINC00479Q96M42 142 aa12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 CSTL1Q9H114 145 aa12.12□□□□□ -0.47
TSPAN4-208ENST00000409531 TRAV34A0A0B4J273 112 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 IGLV2-11P01706 119 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 SRP19P09132 144 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 RPL35P42766 123 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 CDKN1BP46527 198 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 UQCC3Q6UW78 93 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 LINC00322Q6ZN03 302 aaPredicted RBP12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 PRNTQ86SH4 94 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 Q86TA4 180 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 Q8TAT8 98 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 SGK494Q96LW2 274 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 TREM1Q9NP99 234 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 UBE2CO00762 179 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 CRISP2P16562 243 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 COMMD7Q86VX2 200 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 FAM19A4Q96LR4 140 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 SLC35B3Q9H1N7 401 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 ZMAT4Q9H898 229 aa12.11□□□□□ -0.47
TSPAN4-208ENST00000409531 M0R2Z0 102 aa12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 CA1P00915 261 aaPredicted RBP12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 LTAP01374 205 aa12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 CEBPGP53567 150 aa12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 SRSF3P84103 164 aaKnown RBP12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 SPINK13Q1W4C9 94 aa12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 DERL1Q9BUN8 251 aa12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 PARLQ9H300 379 aa12.1□□□□□ -0.47
TSPAN4-208ENST00000409531 GPX1P07203 203 aa12.09□□□□□ -0.47
TSPAN4-208ENST00000409531 BAGE2Q86Y30 109 aa12.09□□□□□ -0.47
TSPAN4-208ENST00000409531 KLLNB2CW77 178 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 GNG4P50150 75 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 FXYD7P58549 80 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 ZNF674Q2M3X9 581 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms