RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 IGHV3OR16-12A0A075B7B8 117 aa14.68□□□□□ -0.06
PTCD3-202ENST00000409326 IGHV4-28A0A0C4DH34 117 aa14.68□□□□□ -0.06
PTCD3-202ENST00000409326 DIRC3C9JPN6 131 aa14.68□□□□□ -0.06
PTCD3-202ENST00000409326 SLC25A5P05141 298 aaKnown RBP14.68□□□□□ -0.06
PTCD3-202ENST00000409326 LEPP41159 167 aa14.68□□□□□ -0.06
PTCD3-202ENST00000409326 MUC7Q8TAX7 377 aa14.68□□□□□ -0.06
PTCD3-202ENST00000409326 FAM213BQ8TBF2 198 aa14.68□□□□□ -0.06
PTCD3-202ENST00000409326 VGLL1Q99990 258 aa14.68□□□□□ -0.06
PTCD3-202ENST00000409326 SMIM9A6NGZ8 99 aa14.67□□□□□ -0.06
PTCD3-202ENST00000409326 TMEM78Q5T7P6 136 aa14.67□□□□□ -0.06
PTCD3-202ENST00000409326 FAM19A4Q96LR4 140 aa14.67□□□□□ -0.06
PTCD3-202ENST00000409326 TMPRSS5Q9H3S3 457 aa14.67□□□□□ -0.06
PTCD3-202ENST00000409326 A0A1W2PRE2 83 aa14.66□□□□□ -0.06
PTCD3-202ENST00000409326 RBMY1A1P0DJD3 496 aaKnown RBP14.66□□□□□ -0.06
PTCD3-202ENST00000409326 RBMY1CP0DJD4 496 aa14.66□□□□□ -0.06
PTCD3-202ENST00000409326 RBMY1FQ15415 496 aaKnown RBP14.66□□□□□ -0.06
PTCD3-202ENST00000409326 MBD3L1Q8WWY6 194 aa14.66□□□□□ -0.06
PTCD3-202ENST00000409326 TMEM208Q9BTX3 173 aa14.66□□□□□ -0.06
PTCD3-202ENST00000409326 GGTLC3B5MD39 225 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 DEFB4AO15263 64 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 RAB5CP51148 216 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 KIR3DS1Q14943 382 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 GFI1BQ5VTD9 330 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 TMEM256Q8N2U0 113 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 C5orf17Q8NAS9 161 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 C20orf144Q9BQM9 153 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 ZNF492Q9P255 531 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 RPH3ALQ9UNE2 315 aa14.65□□□□□ -0.06
PTCD3-202ENST00000409326 CSMD3Q7Z407 3707 aa14.64□□□□□ -0.07
PTCD3-202ENST00000409326 CRISP2P16562 243 aa14.64□□□□□ -0.07
PTCD3-202ENST00000409326 ZNF138P52744 262 aa14.64□□□□□ -0.07
PTCD3-202ENST00000409326 NKX2-5P52952 324 aaPredicted RBP14.64□□□□□ -0.07
PTCD3-202ENST00000409326 GNG5P63218 68 aa14.64□□□□□ -0.07
PTCD3-202ENST00000409326 IL17DQ8TAD2 202 aa14.64□□□□□ -0.07
PTCD3-202ENST00000409326 SFT2D1Q8WV19 159 aa14.64□□□□□ -0.07
PTCD3-202ENST00000409326 TRBV7-9A0A0J9YWB2 115 aa14.63□□□□□ -0.07
PTCD3-202ENST00000409326 KLLNB2CW77 178 aa14.63□□□□□ -0.07
PTCD3-202ENST00000409326 C3orf84H3BNL1 204 aa14.63□□□□□ -0.07
PTCD3-202ENST00000409326 HBE1P02100 147 aa14.63□□□□□ -0.07
PTCD3-202ENST00000409326 SULT1A2P50226 295 aa14.63□□□□□ -0.07
PTCD3-202ENST00000409326 SUMO1P63165 101 aaKnown RBP14.63□□□□□ -0.07
PTCD3-202ENST00000409326 GOLT1AQ6ZVE7 132 aa14.63□□□□□ -0.07
PTCD3-202ENST00000409326 Q8TAT8 98 aa14.63□□□□□ -0.07
PTCD3-202ENST00000409326 YTHDF2Q9Y5A9 579 aaKnown RBP14.63□□□□□ -0.07
PTCD3-202ENST00000409326 STARD9Q9P2P6 4700 aa14.63□□□□□ -0.07
PTCD3-202ENST00000409326 SERTM2A0A1B0GWG4 89 aa14.62□□□□□ -0.07
PTCD3-202ENST00000409326 FAM74A7A6NL05 159 aa14.62□□□□□ -0.07
PTCD3-202ENST00000409326 J3KRW8 73 aa14.62□□□□□ -0.07
PTCD3-202ENST00000409326 NMBP08949 121 aa14.62□□□□□ -0.07
PTCD3-202ENST00000409326 H2AFB1P0C5Y9 115 aa14.62□□□□□ -0.07
PTCD3-202ENST00000409326 UBE2G2P60604 165 aa14.62□□□□□ -0.07
PTCD3-202ENST00000409326 RRN3P1Q2M238 152 aa14.62□□□□□ -0.07
PTCD3-202ENST00000409326 TCRAP04437 139 aa14.61□□□□□ -0.07
PTCD3-202ENST00000409326 ZFAND2AQ8N6M9 145 aa14.61□□□□□ -0.07
PTCD3-202ENST00000409326 LINC01587Q99440 93 aa14.61□□□□□ -0.07
PTCD3-202ENST00000409326 NKX6-2Q9C056 277 aaPredicted RBP14.61□□□□□ -0.07
PTCD3-202ENST00000409326 LENEPQ9Y5L5 61 aa14.61□□□□□ -0.07
PTCD3-202ENST00000409326 ARL2-SNX15V9GYD0 113 aa14.61□□□□□ -0.07
PTCD3-202ENST00000409326 LOC102723971A0A1B0GUV8 181 aa14.6□□□□□ -0.07
PTCD3-202ENST00000409326 C7orf71A4D174 169 aa14.6□□□□□ -0.07
PTCD3-202ENST00000409326 TMEM189A5PLL7 270 aa14.6□□□□□ -0.07
PTCD3-202ENST00000409326 H7BYZ3 331 aa14.6□□□□□ -0.07
PTCD3-202ENST00000409326 TAS2R60P59551 318 aa14.6□□□□□ -0.07
PTCD3-202ENST00000409326 EPDR1Q9UM22 224 aa14.6□□□□□ -0.07
PTCD3-202ENST00000409326 TRAV12-3A0A0B4J271 114 aa14.59□□□□□ -0.07
PTCD3-202ENST00000409326 A0A1B0GV50 99 aa14.59□□□□□ -0.07
PTCD3-202ENST00000409326 ZNF705GA8MUZ8 300 aaPredicted RBP14.59□□□□□ -0.07
PTCD3-202ENST00000409326 GPX1P07203 203 aa14.59□□□□□ -0.07
PTCD3-202ENST00000409326 BTN1A1Q13410 526 aa14.59□□□□□ -0.07
PTCD3-202ENST00000409326 C11orf45Q8TAV5 145 aa14.59□□□□□ -0.07
PTCD3-202ENST00000409326 NIPSNAP3BQ9BS92 247 aa14.59□□□□□ -0.07
PTCD3-202ENST00000409326 ATG101Q9BSB4 218 aa14.59□□□□□ -0.07
PTCD3-202ENST00000409326 TRAV8-1A0A0A6YYK1 113 aa14.58□□□□□ -0.08
PTCD3-202ENST00000409326 K7EQM0 130 aa14.58□□□□□ -0.08
PTCD3-202ENST00000409326 PRR9Q5T870 116 aa14.58□□□□□ -0.08
PTCD3-202ENST00000409326 CYB561D1Q8N8Q1 229 aa14.58□□□□□ -0.08
PTCD3-202ENST00000409326 BOLA1Q9Y3E2 137 aa14.58□□□□□ -0.08
PTCD3-202ENST00000409326 TRAV1-1A0A0B4J248 108 aa14.57□□□□□ -0.08
PTCD3-202ENST00000409326 PRM2P04554 102 aa14.57□□□□□ -0.08
PTCD3-202ENST00000409326 RNASE4P34096 147 aaKnown RBP14.57□□□□□ -0.08
PTCD3-202ENST00000409326 CASC10Q5T4H9 136 aa14.57□□□□□ -0.08
PTCD3-202ENST00000409326 ZFAND6Q6FIF0 208 aa14.57□□□□□ -0.08
PTCD3-202ENST00000409326 ZNF324O75467 553 aaPredicted RBP14.56□□□□□ -0.08
PTCD3-202ENST00000409326 IFNA7P01567 189 aa14.56□□□□□ -0.08
PTCD3-202ENST00000409326 PPT1P50897 306 aa14.56□□□□□ -0.08
PTCD3-202ENST00000409326 EMP1P54849 157 aa14.56□□□□□ -0.08
PTCD3-202ENST00000409326 NANOS2P60321 138 aaKnown RBP14.56□□□□□ -0.08
PTCD3-202ENST00000409326 CCDC28AQ8IWP9 274 aa14.56□□□□□ -0.08
PTCD3-202ENST00000409326 TMEM75Q8N9X5 138 aa14.56□□□□□ -0.08
PTCD3-202ENST00000409326 PYGO2Q9BRQ0 406 aa14.56□□□□□ -0.08
PTCD3-202ENST00000409326 CELA1Q9UNI1 258 aa14.56□□□□□ -0.08
PTCD3-202ENST00000409326 FBLL1A6NHQ2 334 aaKnown RBP14.55□□□□□ -0.08
PTCD3-202ENST00000409326 TEX46H3BTG2 121 aa14.55□□□□□ -0.08
PTCD3-202ENST00000409326 PEX7O00628 323 aa14.55□□□□□ -0.08
PTCD3-202ENST00000409326 PAGE4O60829 102 aa14.55□□□□□ -0.08
PTCD3-202ENST00000409326 HTN1P15515 57 aa14.55□□□□□ -0.08
PTCD3-202ENST00000409326 AZU1P20160 251 aa14.55□□□□□ -0.08
PTCD3-202ENST00000409326 CST9LP1Q5W188 147 aa14.55□□□□□ -0.08
PTCD3-202ENST00000409326 HIST1H2BAQ96A08 127 aa14.55□□□□□ -0.08
PTCD3-202ENST00000409326 SGK494Q96LW2 274 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms