RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TRAV5A0A0B4J249 113 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 L7N2F9 121 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 SSSCA1O60232 199 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 MPDU1O75352 247 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 SCGB1D2O95969 90 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 ORM1P02763 201 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
LSM5-202ENST00000409292 GPX1P07203 203 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 METTL15P1P0C7V9 234 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 HIST1H1EP10412 219 aaKnown RBP5.29□□□□□ -1.56
LSM5-202ENST00000409292 VAMP2P63027 116 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 SLC38A11Q08AI6 406 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 ANXA2RQ3ZCQ2 193 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 IBA57Q5T440 356 aaKnown RBP5.29□□□□□ -1.56
LSM5-202ENST00000409292 Q6ZRN7 208 aaPredicted RBP5.29□□□□□ -1.56
LSM5-202ENST00000409292 SH2D6Q7Z4S9 175 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 MRPL53Q96EL3 112 aaKnown RBP5.29□□□□□ -1.56
LSM5-202ENST00000409292 VSIG2Q96IQ7 327 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 LINC00477Q96M19 166 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 TXNDC17Q9BRA2 123 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 TIMM9Q9Y5J7 89 aa5.29□□□□□ -1.56
LSM5-202ENST00000409292 AGPAT2O15120 278 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 TSC22D2O75157 780 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 ZNF253O75346 499 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 IGHV3-53P01767 116 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 NMBP08949 121 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 OR4E1P0C645 316 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 CT45A10P0DMU9 189 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 RNASE4P34096 147 aaKnown RBP5.28□□□□□ -1.56
LSM5-202ENST00000409292 TCL1AP56279 114 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 TAS2R30P59541 319 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 KRTAP10-1P60331 282 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 ZNF415Q09FC8 603 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 PPP1R1AQ13522 171 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 PYDC2Q56P42 97 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 TMEM78Q5T7P6 136 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 LYPD5Q6UWN5 251 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 DYNC2LI1Q8TCX1 351 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 ZNF431Q8TF32 576 aaPredicted RBP5.28□□□□□ -1.56
LSM5-202ENST00000409292 RAB2BQ8WUD1 216 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 BCL7BQ9BQE9 202 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 PARD6GQ9BYG4 376 aaPredicted RBP5.28□□□□□ -1.56
LSM5-202ENST00000409292 NAA50Q9GZZ1 169 aaKnown RBP5.28□□□□□ -1.56
LSM5-202ENST00000409292 C20orf85Q9H1P6 137 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 DNAJC4Q9NNZ3 241 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 MDFICQ9P1T7 246 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 LRP1BQ9NZR2 4599 aa5.28□□□□□ -1.56
LSM5-202ENST00000409292 C9JCJ5 164 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 MRPS12O15235 138 aaKnown RBP5.27□□□□□ -1.57
LSM5-202ENST00000409292 SPINK4O60575 86 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 PRAF2O60831 178 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 CRYGDP07320 174 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 SNRPCP09234 159 aaKnown RBP5.27□□□□□ -1.57
LSM5-202ENST00000409292 DNAH10OSP0CZ25 163 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 S100A5P33763 92 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 CAMLGP49069 296 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 PPT1P50897 306 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 BCAP31P51572 246 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 CRYBA4P53673 196 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 ZNF846Q147U1 533 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 SERTAD4-AS1Q5TG53 156 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 TMEM14EPQ6UXP3 125 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 PATE2Q6UY27 113 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 VGLL1Q99990 258 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 MRPS26Q9BYN8 205 aaKnown RBP5.27□□□□□ -1.57
LSM5-202ENST00000409292 SRRQ9GZT4 340 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 SH3BGRL3Q9H299 93 aa5.27□□□□□ -1.57
LSM5-202ENST00000409292 FLG2Q5D862 2391 aaPredicted RBP5.26□□□□□ -1.57
LSM5-202ENST00000409292 IGHV1OR15-1A0A075B7D0 117 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 TRAV8-6A0A0B4J262 113 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 CENPXA8MT69 81 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 PRAC2D3DTV9 90 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 E5RGE8 158 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 H3BTX0 84 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 IGLC2P0DOY2 106 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 PRB4P10163 310 aaPredicted RBP5.26□□□□□ -1.57
LSM5-202ENST00000409292 PVALBP20472 110 aaPredicted RBP5.26□□□□□ -1.57
LSM5-202ENST00000409292 FUSP35637 526 aaKnown RBP eCLIP5.26□□□□□ -1.57
LSM5-202ENST00000409292 OPCMLQ14982 345 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 IAH1Q2TAA2 248 aaPredicted RBP5.26□□□□□ -1.57
LSM5-202ENST00000409292 DEFB104AQ8WTQ1 72 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 TM2D2Q9BX73 214 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 MRPL32Q9BYC8 188 aaKnown RBP5.26□□□□□ -1.57
LSM5-202ENST00000409292 GPN1Q9HCN4 374 aaPredicted RBP5.26□□□□□ -1.57
LSM5-202ENST00000409292 SLC39A9Q9NUM3 307 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 MRPL16Q9NX20 251 aaKnown RBP5.26□□□□□ -1.57
LSM5-202ENST00000409292 GSKIPQ9P0R6 139 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 KLF12Q9Y4X4 402 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 DNAH5Q8TE73 4624 aa5.26□□□□□ -1.57
LSM5-202ENST00000409292 C9orf170A2RU37 121 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 NAP1L6A6NFF2 107 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 KLLNB2CW77 178 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 H3BQ15 152 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 SLC17A3O00476 420 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 C1QBP02746 253 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 GYPEP15421 78 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 TNFSF8P32971 234 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 CSN1S1P47710 185 aa5.25□□□□□ -1.57
LSM5-202ENST00000409292 TMBIM6P55061 237 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms