RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 DYNC1H1Q14204 4646 aaKnown RBP13.5□□□□□ -0.25
SMARCB1-204ENST00000407422 FAM122CQ6P4D5 195 aa13.5□□□□□ -0.25
SMARCB1-204ENST00000407422 LINC00612Q8N6U2 182 aa13.5□□□□□ -0.25
SMARCB1-204ENST00000407422 FAM19A4Q96LR4 140 aa13.5□□□□□ -0.25
SMARCB1-204ENST00000407422 ATG101Q9BSB4 218 aa13.5□□□□□ -0.25
SMARCB1-204ENST00000407422 IGKV2-40A0A087WW87 121 aaPredicted RBP13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 MPC2O95563 127 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 IGKV2D-40P01614 121 aaPredicted RBP13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 SLC25A5P05141 298 aaKnown RBP13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 OR10J4P0C629 311 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 NBEAP1P0C6P0 100 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 DEFA1P59665 94 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 DEFA3P59666 94 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 CD300CQ08708 224 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 RNF141Q8WVD5 230 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 FXYD5Q96DB9 178 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 LINC00477Q96M19 166 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 PYGO2Q9BRQ0 406 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 OR51M1Q9H341 326 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 AAMDCQ9H7C9 122 aa13.49□□□□□ -0.25
SMARCB1-204ENST00000407422 DNAH11Q96DT5 4516 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 GAGE12BA1L429 117 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 C7orf71A4D174 169 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 SNURFLB1AK76 121 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 KLLNB2CW77 178 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 GAGE7O76087 117 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 GAGE12FP0CL80 117 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 GAGE12GP0CL81 117 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 GAGE12IP0CL82 117 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 BTN1A1Q13410 526 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 ATP5SQ99766 215 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 VGLL1Q99990 258 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 PAXXQ9BUH6 204 aa13.48□□□□□ -0.25
SMARCB1-204ENST00000407422 ZNF324O75467 553 aaPredicted RBP13.47□□□□□ -0.25
SMARCB1-204ENST00000407422 OR5I1Q13606 314 aa13.47□□□□□ -0.25
SMARCB1-204ENST00000407422 C9orf47Q6ZRZ4 202 aa13.47□□□□□ -0.25
SMARCB1-204ENST00000407422 MRPL32Q9BYC8 188 aaKnown RBP13.47□□□□□ -0.25
SMARCB1-204ENST00000407422 KCNIP2Q9NS61 270 aa13.47□□□□□ -0.25
SMARCB1-204ENST00000407422 FUT9Q9Y231 359 aa13.47□□□□□ -0.25
SMARCB1-204ENST00000407422 HSPB11Q9Y547 144 aa13.47□□□□□ -0.25
SMARCB1-204ENST00000407422 HOXA5P20719 270 aa13.46□□□□□ -0.25
SMARCB1-204ENST00000407422 RNASE4P34096 147 aaKnown RBP13.46□□□□□ -0.25
SMARCB1-204ENST00000407422 ZNF503Q96F45 646 aa13.46□□□□□ -0.25
SMARCB1-204ENST00000407422 PHYHIPLQ96FC7 376 aa13.46□□□□□ -0.25
SMARCB1-204ENST00000407422 SMIM3Q9BZL3 60 aa13.46□□□□□ -0.25
SMARCB1-204ENST00000407422 TRAV26-1A0A087WT03 109 aa13.46□□□□□ -0.26
SMARCB1-204ENST00000407422 C17orf112F2Z3M2 114 aa13.46□□□□□ -0.26
SMARCB1-204ENST00000407422 FAM3BP58499 235 aaPredicted RBP13.46□□□□□ -0.26
SMARCB1-204ENST00000407422 Q6ZQT7 251 aa13.46□□□□□ -0.26
SMARCB1-204ENST00000407422 Q6ZTI0 123 aa13.46□□□□□ -0.26
SMARCB1-204ENST00000407422 ZNRF2Q8NHG8 242 aa13.46□□□□□ -0.26
SMARCB1-204ENST00000407422 GSN-AS1Q9NRJ2 163 aa13.46□□□□□ -0.26
SMARCB1-204ENST00000407422 MBD2Q9UBB5 411 aa13.46□□□□□ -0.26
SMARCB1-204ENST00000407422 PET100P0DJ07 73 aa13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 CRISP2P16562 243 aa13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 RPL12P30050 165 aaKnown RBP13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 DAZ2Q13117 558 aaKnown RBP13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 FFAR4Q5NUL3 377 aa13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 PRR9Q5T870 116 aa13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 ZFAND2AQ8N6M9 145 aa13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 C11orf72Q8NBR9 251 aa13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 LINC00588Q9Y4M8 146 aa13.45□□□□□ -0.26
SMARCB1-204ENST00000407422 A0A0J9YY99 117 aa13.44□□□□□ -0.26
SMARCB1-204ENST00000407422 OR7C2O60412 319 aa13.44□□□□□ -0.26
SMARCB1-204ENST00000407422 GPX1P07203 203 aa13.44□□□□□ -0.26
SMARCB1-204ENST00000407422 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
SMARCB1-204ENST00000407422 EIF3GO75821 320 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCB1-204ENST00000407422 M6PRP20645 277 aa13.43□□□□□ -0.26
SMARCB1-204ENST00000407422 C1orf134Q5TEV5 83 aa13.43□□□□□ -0.26
SMARCB1-204ENST00000407422 GNPNAT1Q96EK6 184 aaPredicted RBP13.43□□□□□ -0.26
SMARCB1-204ENST00000407422 TMPRSS5Q9H3S3 457 aa13.43□□□□□ -0.26
SMARCB1-204ENST00000407422 WFDC1Q9HC57 220 aa13.43□□□□□ -0.26
SMARCB1-204ENST00000407422 ZNF492Q9P255 531 aa13.43□□□□□ -0.26
SMARCB1-204ENST00000407422 MUC4Q99102 2169 aa13.43□□□□□ -0.26
SMARCB1-204ENST00000407422 CCL18P55774 89 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 RANP62826 216 aaKnown RBP13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 EIF4E3Q8N5X7 224 aaKnown RBP13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 Q8TAT8 98 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 LINC00467Q9BRT7 94 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 IFNA5P01569 189 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 NMBP08949 121 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 SSX7Q7RTT5 188 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 ZNF680Q8NEM1 530 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 SCGB1C1Q8TD33 95 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 TP53TG3Q9ULZ0 132 aa13.42□□□□□ -0.26
SMARCB1-204ENST00000407422 NBDYA0A0U1RRE5 68 aa13.41□□□□□ -0.26
SMARCB1-204ENST00000407422 UBE2L3P68036 154 aaKnown RBP13.41□□□□□ -0.26
SMARCB1-204ENST00000407422 ANXA2RQ3ZCQ2 193 aa13.41□□□□□ -0.26
SMARCB1-204ENST00000407422 SOHLH1Q5JUK2 328 aa13.41□□□□□ -0.26
SMARCB1-204ENST00000407422 RXFP4Q8TDU9 374 aa13.41□□□□□ -0.26
SMARCB1-204ENST00000407422 Q9H3A6 140 aa13.41□□□□□ -0.26
SMARCB1-204ENST00000407422 KLF12Q9Y4X4 402 aa13.41□□□□□ -0.26
SMARCB1-204ENST00000407422 ZNF138P52744 262 aa13.4□□□□□ -0.26
SMARCB1-204ENST00000407422 ALG5Q9Y673 324 aa13.4□□□□□ -0.26
SMARCB1-204ENST00000407422 TRGV2A0A075B6R0 118 aa13.39□□□□□ -0.27
SMARCB1-204ENST00000407422 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
SMARCB1-204ENST00000407422 RGS13O14921 159 aa13.39□□□□□ -0.27
SMARCB1-204ENST00000407422 KHDC3LQ587J8 217 aa13.39□□□□□ -0.27
SMARCB1-204ENST00000407422 LYPD1Q8N2G4 141 aa13.39□□□□□ -0.27
SMARCB1-204ENST00000407422 IGHV1OR15-1A0A075B7D0 117 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms