RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 NPIPB6E9PJ23 425 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 TAS2R60P59551 318 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 EBLN2Q6P2I7 272 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 C9orf47Q6ZRZ4 202 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 PRNTQ86SH4 94 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 ASCL2Q99929 193 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 SEC11CQ9BY50 192 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 AGPAT4-IT1Q9H0P7 198 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 PSG8Q9UQ74 426 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 PKD1L1Q8TDX9 2849 aa15.2■□□□□ 0.02
CHKB-201ENST00000406938 KNCNA6PVL3 124 aa15.19■□□□□ 0.02
CHKB-201ENST00000406938 S100A9P06702 114 aaKnown RBP15.19■□□□□ 0.02
CHKB-201ENST00000406938 FAM74A3Q4VXF1 159 aa15.19■□□□□ 0.02
CHKB-201ENST00000406938 TMEM78Q5T7P6 136 aa15.19■□□□□ 0.02
CHKB-201ENST00000406938 GTSCR1Q86UQ5 136 aa15.19■□□□□ 0.02
CHKB-201ENST00000406938 FAM110AQ9BQ89 295 aa15.19■□□□□ 0.02
CHKB-201ENST00000406938 C19orf73Q9NVV2 129 aa15.19■□□□□ 0.02
CHKB-201ENST00000406938 CMYA5Q8N3K9 4069 aa15.19■□□□□ 0.02
CHKB-201ENST00000406938 PGPEP1LA6NFU8 196 aa15.18■□□□□ 0.02
CHKB-201ENST00000406938 LTAP01374 205 aa15.18■□□□□ 0.02
CHKB-201ENST00000406938 GNG4P50150 75 aa15.18■□□□□ 0.02
CHKB-201ENST00000406938 CMC4P56277 68 aaPredicted RBP15.18■□□□□ 0.02
CHKB-201ENST00000406938 ACTL10Q5JWF8 245 aa15.18■□□□□ 0.02
CHKB-201ENST00000406938 WFDC10AQ9H1F0 79 aa15.18■□□□□ 0.02
CHKB-201ENST00000406938 TRBV6-1A0A0K0K1D8 114 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 FBLL1A6NHQ2 334 aaKnown RBP15.17■□□□□ 0.02
CHKB-201ENST00000406938 C9JCJ5 164 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 NIPSNAP3BQ9BS92 247 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 SORL1Q92673 2214 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 HLA-DRB4P13762 266 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 ZNF138P52744 262 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 C10orf91Q5T1B1 145 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 BAGE2Q86Y30 109 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 NHLRC2Q8NBF2 726 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 HLA-DRB4X5D2U9 266 aa15.17■□□□□ 0.02
CHKB-201ENST00000406938 G3V4G9 280 aa15.16■□□□□ 0.02
CHKB-201ENST00000406938 TVP23CQ96ET8 276 aa15.16■□□□□ 0.02
CHKB-201ENST00000406938 LINC00477Q96M19 166 aa15.16■□□□□ 0.02
CHKB-201ENST00000406938 ZNF492Q9P255 531 aa15.16■□□□□ 0.02
CHKB-201ENST00000406938 NAT8Q9UHE5 227 aa15.16■□□□□ 0.02
CHKB-201ENST00000406938 CARHSP1Q9Y2V2 147 aaKnown RBP15.16■□□□□ 0.02
CHKB-201ENST00000406938 IGKV3-20P01619 116 aa15.15■□□□□ 0.02
CHKB-201ENST00000406938 CT45A10P0DMU9 189 aa15.15■□□□□ 0.02
CHKB-201ENST00000406938 EGFEM1PQ0D2K5 195 aa15.15■□□□□ 0.02
CHKB-201ENST00000406938 TMEM241Q24JQ0 296 aa15.15■□□□□ 0.02
CHKB-201ENST00000406938 OR4B1Q8NGF8 309 aa15.15■□□□□ 0.02
CHKB-201ENST00000406938 AURKAIP1Q9NWT8 199 aaPredicted RBP15.15■□□□□ 0.02
CHKB-201ENST00000406938 H3BMM0 161 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 DUSP14O95147 198 aaKnown RBP15.14■□□□□ 0.01
CHKB-201ENST00000406938 IGLV2-8P01709 118 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 SAMD5Q5TGI4 173 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 PRR25Q96S07 402 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 PPP1R14DQ9NXH3 145 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 ZFP30Q9Y2G7 519 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 KRTAP10-11P60412 298 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 LINC01551Q86U37 167 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 C8orf49Q96NF6 230 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 NDFIP1Q9BT67 221 aa15.14■□□□□ 0.01
CHKB-201ENST00000406938 APOC3P02656 99 aa15.13■□□□□ 0.01
CHKB-201ENST00000406938 OCC1Q8TAD7 63 aa15.13■□□□□ 0.01
CHKB-201ENST00000406938 MLST8Q9BVC4 326 aa15.13■□□□□ 0.01
CHKB-201ENST00000406938 SDF2L1Q9HCN8 221 aa15.13■□□□□ 0.01
CHKB-201ENST00000406938 DNHD1Q96M86 4753 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 K7EN84 100 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 SAPCD1Q5SSQ6 148 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 STHQ8IWL8 128 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 TMEM183AQ8IXX5 376 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 DEFB125Q8N687 156 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 SMIM12Q96EX1 92 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 FAM19A4Q96LR4 140 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 LENEPQ9Y5L5 61 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 LY96Q9Y6Y9 160 aa15.12■□□□□ 0.01
CHKB-201ENST00000406938 A8MTW9 85 aa15.11■□□□□ 0.01
CHKB-201ENST00000406938 MGST1P10620 155 aaKnown RBP15.11■□□□□ 0.01
CHKB-201ENST00000406938 RPL23P62829 140 aaKnown RBP15.11■□□□□ 0.01
CHKB-201ENST00000406938 ADIRFQ15847 76 aa15.11■□□□□ 0.01
CHKB-201ENST00000406938 AMTNQ6UX39 209 aa15.11■□□□□ 0.01
CHKB-201ENST00000406938 RBMY1BA6NDE4 496 aaKnown RBP15.1■□□□□ 0.01
CHKB-201ENST00000406938 RBMY1EA6NEQ0 496 aaKnown RBP15.1■□□□□ 0.01
CHKB-201ENST00000406938 RBMY1DP0C7P1 496 aaKnown RBP15.1■□□□□ 0.01
CHKB-201ENST00000406938 Q8N1Y9 231 aa15.1■□□□□ 0.01
CHKB-201ENST00000406938 ZC2HC1AQ96GY0 325 aa15.1■□□□□ 0.01
CHKB-201ENST00000406938 ODF3Q96PU9 254 aa15.1■□□□□ 0.01
CHKB-201ENST00000406938 PNRC1Q12796 327 aaPredicted RBP15.1■□□□□ 0.01
CHKB-201ENST00000406938 TRPT1Q86TN4 253 aaKnown RBP15.1■□□□□ 0.01
CHKB-201ENST00000406938 ZMAT5Q9UDW3 170 aaKnown RBP15.1■□□□□ 0.01
CHKB-201ENST00000406938 AGRNO00468 2067 aa15.09■□□□□ 0.01
CHKB-201ENST00000406938 TRBV7-9A0A0J9YWB2 115 aa15.09■□□□□ 0.01
CHKB-201ENST00000406938 J3KRW8 73 aa15.09■□□□□ 0.01
CHKB-201ENST00000406938 OR5I1Q13606 314 aa15.09■□□□□ 0.01
CHKB-201ENST00000406938 PRR27Q6MZM9 219 aa15.09■□□□□ 0.01
CHKB-201ENST00000406938 ZFAND2AQ8N6M9 145 aa15.09■□□□□ 0.01
CHKB-201ENST00000406938 M0R2Z0 102 aa15.08■□□□□ 0
CHKB-201ENST00000406938 CRISP2P16562 243 aa15.08■□□□□ 0
CHKB-201ENST00000406938 PRR9Q5T870 116 aa15.08■□□□□ 0
CHKB-201ENST00000406938 COX8CQ7Z4L0 72 aa15.08■□□□□ 0
CHKB-201ENST00000406938 CLUHP3Q96NS8 147 aa15.08■□□□□ 0
CHKB-201ENST00000406938 M0R036 132 aa15.07■□□□□ 0
CHKB-201ENST00000406938 LEPP41159 167 aa15.07■□□□□ 0
CHKB-201ENST00000406938 KIR3DS1Q14943 382 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms