RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 HTN1P15515 57 aa14.75□□□□□ -0.05
RHBDD3-202ENST00000406335 TMEM256Q8N2U0 113 aa14.75□□□□□ -0.05
RHBDD3-202ENST00000406335 LINC00588Q9Y4M8 146 aa14.75□□□□□ -0.05
RHBDD3-202ENST00000406335 TIMM9Q9Y5J7 89 aa14.75□□□□□ -0.05
RHBDD3-202ENST00000406335 J3KRW8 73 aa14.74□□□□□ -0.05
RHBDD3-202ENST00000406335 TSPOP30536 169 aa14.74□□□□□ -0.05
RHBDD3-202ENST00000406335 SSX7Q7RTT5 188 aa14.74□□□□□ -0.05
RHBDD3-202ENST00000406335 EXOC3-AS1Q8N2X6 119 aa14.74□□□□□ -0.05
RHBDD3-202ENST00000406335 Q9H8V8 135 aa14.74□□□□□ -0.05
RHBDD3-202ENST00000406335 WFDC1Q9HC57 220 aa14.74□□□□□ -0.05
RHBDD3-202ENST00000406335 KCNIP2Q9NS61 270 aa14.74□□□□□ -0.05
RHBDD3-202ENST00000406335 CBY3A6NI87 242 aa14.73□□□□□ -0.05
RHBDD3-202ENST00000406335 NPIPB6E9PJ23 425 aa14.73□□□□□ -0.05
RHBDD3-202ENST00000406335 C17orf112F2Z3M2 114 aa14.73□□□□□ -0.05
RHBDD3-202ENST00000406335 TAS2R60P59551 318 aa14.73□□□□□ -0.05
RHBDD3-202ENST00000406335 ERCC8Q13216 396 aa14.73□□□□□ -0.05
RHBDD3-202ENST00000406335 PDE6HQ13956 83 aa14.73□□□□□ -0.05
RHBDD3-202ENST00000406335 GFI1BQ5VTD9 330 aa14.73□□□□□ -0.05
RHBDD3-202ENST00000406335 MRPL53Q96EL3 112 aaKnown RBP14.73□□□□□ -0.05
RHBDD3-202ENST00000406335 OR10J4P0C629 311 aa14.72□□□□□ -0.05
RHBDD3-202ENST00000406335 FFAR4Q5NUL3 377 aa14.72□□□□□ -0.05
RHBDD3-202ENST00000406335 MRPL32Q9BYC8 188 aaKnown RBP14.72□□□□□ -0.05
RHBDD3-202ENST00000406335 OR51M1Q9H341 326 aa14.72□□□□□ -0.05
RHBDD3-202ENST00000406335 FUT9Q9Y231 359 aa14.72□□□□□ -0.05
RHBDD3-202ENST00000406335 IFNA5P01569 189 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 NBEAP1P0C6P0 100 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 OR5I1Q13606 314 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 ICAM4Q14773 271 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 SCGB1C1Q8TD33 95 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 RNF141Q8WVD5 230 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 FXYD5Q96DB9 178 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 PAXXQ9BUH6 204 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 PRELID1Q9Y255 219 aa14.71□□□□□ -0.05
RHBDD3-202ENST00000406335 TTC32Q5I0X7 151 aa14.7□□□□□ -0.06
RHBDD3-202ENST00000406335 ZNF503Q96F45 646 aa14.7□□□□□ -0.06
RHBDD3-202ENST00000406335 ODF3Q96PU9 254 aa14.7□□□□□ -0.06
RHBDD3-202ENST00000406335 C20orf144Q9BQM9 153 aa14.7□□□□□ -0.06
RHBDD3-202ENST00000406335 MED28Q9H204 178 aa14.7□□□□□ -0.06
RHBDD3-202ENST00000406335 TRAV12-3A0A0B4J271 114 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 H7BYZ3 331 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 OR7C2O60412 319 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 EIF3GO75821 320 aaKnown RBP eCLIP14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 LEPP41159 167 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 FAM122CQ6P4D5 195 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 RNASE8Q8TDE3 154 aaKnown RBP14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 PHYHIPLQ96FC7 376 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 C16orf74Q96GX8 76 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 AGPAT4-IT1Q9H0P7 198 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 AAMDCQ9H7C9 122 aa14.69□□□□□ -0.06
RHBDD3-202ENST00000406335 IGKV2-40A0A087WW87 121 aaPredicted RBP14.68□□□□□ -0.06
RHBDD3-202ENST00000406335 IGKV2D-40P01614 121 aaPredicted RBP14.68□□□□□ -0.06
RHBDD3-202ENST00000406335 TIMM8BQ9Y5J9 83 aaPredicted RBP14.68□□□□□ -0.06
RHBDD3-202ENST00000406335 LRP1BQ9NZR2 4599 aa14.67□□□□□ -0.06
RHBDD3-202ENST00000406335 TMEM263Q8WUH6 116 aaKnown RBP14.67□□□□□ -0.06
RHBDD3-202ENST00000406335 GNPNAT1Q96EK6 184 aaPredicted RBP14.67□□□□□ -0.06
RHBDD3-202ENST00000406335 NOP10Q9NPE3 64 aaKnown RBP14.67□□□□□ -0.06
RHBDD3-202ENST00000406335 EPM2AB3EWF7 344 aa14.66□□□□□ -0.06
RHBDD3-202ENST00000406335 Q5BKY6 102 aa14.66□□□□□ -0.06
RHBDD3-202ENST00000406335 ZNF493Q6ZR52 646 aa14.66□□□□□ -0.06
RHBDD3-202ENST00000406335 FAM19A4Q96LR4 140 aa14.66□□□□□ -0.06
RHBDD3-202ENST00000406335 LINC00477Q96M19 166 aa14.66□□□□□ -0.06
RHBDD3-202ENST00000406335 VGLL1Q99990 258 aa14.66□□□□□ -0.06
RHBDD3-202ENST00000406335 KRTAP10-2P60368 255 aa14.65□□□□□ -0.06
RHBDD3-202ENST00000406335 C9orf47Q6ZRZ4 202 aa14.65□□□□□ -0.06
RHBDD3-202ENST00000406335 C7orf71A4D174 169 aa14.64□□□□□ -0.07
RHBDD3-202ENST00000406335 SLC25A5P05141 298 aaKnown RBP14.64□□□□□ -0.07
RHBDD3-202ENST00000406335 RANP62826 216 aaKnown RBP14.64□□□□□ -0.07
RHBDD3-202ENST00000406335 UBE2L3P68036 154 aaKnown RBP14.64□□□□□ -0.07
RHBDD3-202ENST00000406335 CD300CQ08708 224 aa14.64□□□□□ -0.07
RHBDD3-202ENST00000406335 BTN1A1Q13410 526 aa14.64□□□□□ -0.07
RHBDD3-202ENST00000406335 TRAV26-1A0A087WT03 109 aa14.63□□□□□ -0.07
RHBDD3-202ENST00000406335 A0A0J9YY99 117 aa14.63□□□□□ -0.07
RHBDD3-202ENST00000406335 KLLNB2CW77 178 aa14.63□□□□□ -0.07
RHBDD3-202ENST00000406335 RAB2AP61019 212 aa14.63□□□□□ -0.07
RHBDD3-202ENST00000406335 KHDC3LQ587J8 217 aa14.63□□□□□ -0.07
RHBDD3-202ENST00000406335 CCDC28AQ8IWP9 274 aa14.63□□□□□ -0.07
RHBDD3-202ENST00000406335 Q9H3A6 140 aa14.63□□□□□ -0.07
RHBDD3-202ENST00000406335 ZNF324O75467 553 aaPredicted RBP14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 CRISP2P16562 243 aa14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 M6PRP20645 277 aa14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 RNASE4P34096 147 aaKnown RBP14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 TAS2R45P59539 299 aa14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 ACOT6Q3I5F7 207 aaPredicted RBP14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 TMEM78Q5T7P6 136 aa14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 PRR9Q5T870 116 aa14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 AQP10Q96PS8 301 aa14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 PYGO2Q9BRQ0 406 aa14.62□□□□□ -0.07
RHBDD3-202ENST00000406335 GIPP09681 153 aaPredicted RBP14.61□□□□□ -0.07
RHBDD3-202ENST00000406335 INAFM2P0DMQ5 153 aa14.61□□□□□ -0.07
RHBDD3-202ENST00000406335 Q6ZQT7 251 aa14.61□□□□□ -0.07
RHBDD3-202ENST00000406335 ZFAND2AQ8N6M9 145 aa14.61□□□□□ -0.07
RHBDD3-202ENST00000406335 ZNF492Q9P255 531 aa14.61□□□□□ -0.07
RHBDD3-202ENST00000406335 GPX1P07203 203 aa14.6□□□□□ -0.07
RHBDD3-202ENST00000406335 BTF3P20290 206 aaKnown RBP14.6□□□□□ -0.07
RHBDD3-202ENST00000406335 LYPD1Q8N2G4 141 aa14.6□□□□□ -0.07
RHBDD3-202ENST00000406335 HSD17B11Q8NBQ5 300 aa14.6□□□□□ -0.07
RHBDD3-202ENST00000406335 Q8TAT8 98 aa14.6□□□□□ -0.07
RHBDD3-202ENST00000406335 RXFP4Q8TDU9 374 aa14.6□□□□□ -0.07
RHBDD3-202ENST00000406335 A0A1W2PPQ1 181 aa14.59□□□□□ -0.07
RHBDD3-202ENST00000406335 A0A1W2PPV4 95 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms