RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 GAR1Q9NY12 217 aaKnown RBP10.72□□□□□ -0.69
PRAME-205ENST00000405655 RNF24Q9Y225 148 aa10.72□□□□□ -0.69
PRAME-205ENST00000405655 J3KRW8 73 aa10.71□□□□□ -0.69
PRAME-205ENST00000405655 CD33P20138 364 aa10.71□□□□□ -0.69
PRAME-205ENST00000405655 CSN1S1P47710 185 aa10.71□□□□□ -0.69
PRAME-205ENST00000405655 C16orf54Q6UWD8 224 aa10.71□□□□□ -0.69
PRAME-205ENST00000405655 C9orf139Q6ZV77 190 aa10.71□□□□□ -0.69
PRAME-205ENST00000405655 HIST1H2BLQ99880 126 aa10.71□□□□□ -0.69
PRAME-205ENST00000405655 F6UB75 175 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 ZNF124Q15973 351 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 NPFFR1Q9GZQ6 430 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 ESM1Q9NQ30 184 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 NDUFA4O00483 81 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 SH2D1AO60880 128 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 AMBPP02760 352 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 PRR25Q96S07 402 aa10.7□□□□□ -0.7
PRAME-205ENST00000405655 PEF1Q9UBV8 284 aaKnown RBP10.7□□□□□ -0.7
PRAME-205ENST00000405655 FOXA3P55318 350 aaPredicted RBP10.69□□□□□ -0.7
PRAME-205ENST00000405655 IQCJQ1A5X6 159 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 S100A7AQ86SG5 101 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 WFDC3Q8IUB2 231 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 RHPN1-AS1Q9BWJ2 59 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 AGPAT4-IT1Q9H0P7 198 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 ZNF492Q9P255 531 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 A0A087X0K7 114 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 H3BUA1 57 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 K7EQM0 130 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 WFDC12Q8WWY7 111 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 TMEM190Q8WZ59 177 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 RCHY1Q96PM5 261 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 YAE1D1Q9NRH1 226 aa10.69□□□□□ -0.7
PRAME-205ENST00000405655 IGHV4OR15-8A0A075B7B6 117 aa10.68□□□□□ -0.7
PRAME-205ENST00000405655 A0A087WW49 117 aa10.68□□□□□ -0.7
PRAME-205ENST00000405655 NPIPB6E9PJ23 425 aa10.68□□□□□ -0.7
PRAME-205ENST00000405655 TFPI2P48307 235 aa10.68□□□□□ -0.7
PRAME-205ENST00000405655 C16orf92Q96LL3 132 aa10.68□□□□□ -0.7
PRAME-205ENST00000405655 GNB1LQ9BYB4 327 aa10.68□□□□□ -0.7
PRAME-205ENST00000405655 PRDM13Q9H4Q3 707 aa10.68□□□□□ -0.7
PRAME-205ENST00000405655 A0A0G2JLM5 398 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 ARMS2P0C7Q2 107 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 S100A2P29034 98 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 SRIP30626 198 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 SRSF2Q01130 221 aaKnown RBP10.67□□□□□ -0.7
PRAME-205ENST00000405655 KIR3DS1Q14943 382 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 ZFP30Q9Y2G7 519 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 SERF1AO75920 110 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 SYNJ2BPP57105 145 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 TCTEX1D4Q5JR98 221 aa10.67□□□□□ -0.7
PRAME-205ENST00000405655 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 A8MWL6 223 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 M0QZ24 198 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 SPRY2O43597 315 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 CRISP2P16562 243 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 PRR9Q5T870 116 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 WIPF2Q8TF74 440 aaPredicted RBP10.66□□□□□ -0.7
PRAME-205ENST00000405655 PACRGQ96M98 296 aaPredicted RBP10.66□□□□□ -0.7
PRAME-205ENST00000405655 C11orf21Q9P2W6 132 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 IGHV7-4-1A0A0J9YVY3 117 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 A0A1B0GXF2 115 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 DNAJC9-AS1A6NH13 148 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 BRI3O95415 125 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 APCSP02743 223 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 C1orf194Q5T5A4 169 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 SMIM12Q96EX1 92 aa10.66□□□□□ -0.7
PRAME-205ENST00000405655 SLURP1P55000 103 aa10.65□□□□□ -0.7
PRAME-205ENST00000405655 RNF114Q9Y508 228 aa10.65□□□□□ -0.7
PRAME-205ENST00000405655 HIVEP1P15822 2718 aa10.65□□□□□ -0.7
PRAME-205ENST00000405655 HIVEP2P31629 2446 aa10.65□□□□□ -0.71
PRAME-205ENST00000405655 SOCS3O14543 225 aa10.65□□□□□ -0.71
PRAME-205ENST00000405655 FOXE3Q13461 319 aa10.65□□□□□ -0.71
PRAME-205ENST00000405655 KHDC1LQ5JSQ8 128 aa10.65□□□□□ -0.71
PRAME-205ENST00000405655 COA6Q5JTJ3 125 aaKnown RBP10.65□□□□□ -0.71
PRAME-205ENST00000405655 ZNF738Q8NE65 137 aa10.65□□□□□ -0.71
PRAME-205ENST00000405655 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
PRAME-205ENST00000405655 ZNF253O75346 499 aa10.64□□□□□ -0.71
PRAME-205ENST00000405655 RBPMS2Q6ZRY4 209 aaKnown RBP10.64□□□□□ -0.71
PRAME-205ENST00000405655 BAGE3Q86Y29 109 aa10.64□□□□□ -0.71
PRAME-205ENST00000405655 KLHDC1Q8N7A1 406 aa10.64□□□□□ -0.71
PRAME-205ENST00000405655 DAZ1Q9NQZ3 744 aaKnown RBP10.64□□□□□ -0.71
PRAME-205ENST00000405655 SMPXQ9UHP9 88 aa10.64□□□□□ -0.71
PRAME-205ENST00000405655 FLNBO75369 2602 aaKnown RBP10.64□□□□□ -0.71
PRAME-205ENST00000405655 CT45A10P0DMU9 189 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 FAM162BQ5T6X4 162 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 LYZL1Q6UWQ5 148 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 Q6ZSV7 163 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 ATP6V0BQ99437 205 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 FN1P02751 2386 aaKnown RBP10.63□□□□□ -0.71
PRAME-205ENST00000405655 TMEM189A5PLL7 270 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 ORM1P02763 201 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 MSRB1Q9NZV6 116 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 ZNF580Q9UK33 172 aa10.63□□□□□ -0.71
PRAME-205ENST00000405655 HOXD3P31249 432 aaPredicted RBP10.62□□□□□ -0.71
PRAME-205ENST00000405655 WDR73Q6P4I2 378 aa10.62□□□□□ -0.71
PRAME-205ENST00000405655 FAM19A2Q8N3H0 131 aa10.62□□□□□ -0.71
PRAME-205ENST00000405655 TEX29Q8N6K0 151 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms