RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 C3orf36Q3SXR2 165 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 MTURNQ8N3F0 131 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 NHP2Q9NX24 153 aaKnown RBP12.12□□□□□ -0.47
ATG4B-205ENST00000404914 IGLV1-47P01700 117 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 LEPP41159 167 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 WFDC2Q14508 124 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 TMEM95Q3KNT9 176 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 CHTOPQ9Y3Y2 248 aaKnown RBP12.12□□□□□ -0.47
ATG4B-205ENST00000404914 WNK2Q9Y3S1 2297 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 K7ENP7 123 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 PPIFP30405 207 aaKnown RBP12.12□□□□□ -0.47
ATG4B-205ENST00000404914 BSPH1Q075Z2 132 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 SMAGPQ0VAQ4 97 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 VGLL1Q99990 258 aa12.12□□□□□ -0.47
ATG4B-205ENST00000404914 TRBV25-1A0A075B6N4 114 aa12.11□□□□□ -0.47
ATG4B-205ENST00000404914 NUP37Q8NFH4 326 aa12.11□□□□□ -0.47
ATG4B-205ENST00000404914 PLGLAQ15195 96 aa12.11□□□□□ -0.47
ATG4B-205ENST00000404914 PSMG3-AS1Q96PY0 264 aa12.11□□□□□ -0.47
ATG4B-205ENST00000404914 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 LYNX1G3V0Z9 82 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 LYNX1P0DP58 116 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 MAPKAPK5-AS1Q8N8E1 139 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 PRR25Q96S07 402 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 CIDEAO60543 219 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 CEACAM4O75871 244 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 IGHV3-23P01764 117 aa12.1□□□□□ -0.47
ATG4B-205ENST00000404914 TSSC4Q9Y5U2 329 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-205ENST00000404914 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-205ENST00000404914 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 CNIH1O95406 144 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 SMIM17P0DL12 118 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 SH2D6Q7Z4S9 175 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 LYPD1Q8N2G4 141 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 FOXC2Q99958 501 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 PRSS1P07477 247 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 AMTNQ6UX39 209 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 GFRALQ6UXV0 394 aa12.09□□□□□ -0.47
ATG4B-205ENST00000404914 IGHG4P01861 327 aa12.08□□□□□ -0.47
ATG4B-205ENST00000404914 THBDP07204 575 aa12.08□□□□□ -0.47
ATG4B-205ENST00000404914 ZC2HC1BQ5TFG8 222 aa12.08□□□□□ -0.47
ATG4B-205ENST00000404914 TMEM108Q6UXF1 575 aa12.08□□□□□ -0.47
ATG4B-205ENST00000404914 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
ATG4B-205ENST00000404914 AAMDCQ9H7C9 122 aa12.08□□□□□ -0.48
ATG4B-205ENST00000404914 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
ATG4B-205ENST00000404914 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-205ENST00000404914 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
ATG4B-205ENST00000404914 TMEM158Q8WZ71 300 aa12.07□□□□□ -0.48
ATG4B-205ENST00000404914 ARPC1AQ92747 370 aa12.07□□□□□ -0.48
ATG4B-205ENST00000404914 SPTA1P02549 2419 aa12.07□□□□□ -0.48
ATG4B-205ENST00000404914 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
ATG4B-205ENST00000404914 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-205ENST00000404914 H3BMG7 143 aa12.07□□□□□ -0.48
ATG4B-205ENST00000404914 CEACAM3P40198 252 aa12.07□□□□□ -0.48
ATG4B-205ENST00000404914 HIGD1BQ9P298 99 aa12.07□□□□□ -0.48
ATG4B-205ENST00000404914 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 IGKCP01834 107 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 ORM1P02763 201 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 FCER1GP30273 86 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 INSL3P51460 131 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 MAP1LC3AQ9H492 121 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 IGHV3-35A0A0C4DH35 117 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 ETDBQ3ZM63 59 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 CEND1Q8N111 149 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 RNASE6Q93091 150 aaKnown RBP12.06□□□□□ -0.48
ATG4B-205ENST00000404914 TMEM160Q9NX00 188 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 SMAD5-AS1Q9Y6J3 95 aa12.06□□□□□ -0.48
ATG4B-205ENST00000404914 IGLL5B9A064 214 aa12.05□□□□□ -0.48
ATG4B-205ENST00000404914 E9PLD3 99 aa12.05□□□□□ -0.48
ATG4B-205ENST00000404914 TIMM23O14925 209 aa12.05□□□□□ -0.48
ATG4B-205ENST00000404914 ERCC8Q13216 396 aa12.05□□□□□ -0.48
ATG4B-205ENST00000404914 LCNL1Q6ZST4 164 aa12.05□□□□□ -0.48
ATG4B-205ENST00000404914 PIFOQ8TCI5 191 aa12.05□□□□□ -0.48
ATG4B-205ENST00000404914 RPEQ96AT9 228 aa12.05□□□□□ -0.48
ATG4B-205ENST00000404914 PRRG2O14669 202 aa12.05□□□□□ -0.48
ATG4B-205ENST00000404914 MRPL35Q9NZE8 188 aaKnown RBP12.05□□□□□ -0.48
ATG4B-205ENST00000404914 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 SPAG8Q99932 426 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-205ENST00000404914 TM2D2Q9BX73 214 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 KAAG1Q9UBP8 84 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 SH3BGRL2Q9UJC5 107 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 GAGE12HA6NDE8 117 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 TRGV3P03979 118 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 FANCD2OSQ96PS1 177 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 TRAV26-2A0A0B4J265 109 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 SIGMAR1Q99720 223 aa12.04□□□□□ -0.48
ATG4B-205ENST00000404914 A0A0G2JNJ9 132 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 Q6ZQT7 251 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 Q9UFV3 132 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 ZFYVE26Q68DK2 2539 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 IGLV2-18A0A075B6J9 118 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 LINC01546A6NGU7 62 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 PDE6HQ13956 83 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 FOXI2Q6ZQN5 318 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 COX8CQ7Z4L0 72 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 CLUHP3Q96NS8 147 aa12.03□□□□□ -0.48
ATG4B-205ENST00000404914 ABCA4P78363 2273 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms