RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	RAB11A	P62491	216 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SRPX	P78539	464 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	HIST1H1A	Q02539	215 aa	Predicted RBP	4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	FGL1	Q08830	312 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PNRC1	Q12796	327 aa	Predicted RBP	4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SMCO1	Q147U7	214 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SPANXN2	Q5MJ10	180 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461		Q5VSD8	79 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	GPR107	Q5VW38	600 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	AMTN	Q6UX39	209 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	S100A7A	Q86SG5	101 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SELENOH	Q8IZQ5	122 aa	Known RBP	4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	OR4D5	Q8NGN0	318 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RXFP4	Q8TDU9	374 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	GLYATL2	Q8WU03	294 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SCGB3A2	Q96PL1	93 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ZNF586	Q9NXT0	402 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	MRPS16	Q9Y3D3	137 aa	Known RBP	4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TMEM56-RWDD3	S4R434	201 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PKD1	P98161	4303 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LRP1B	Q9NZR2	4599 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	IGKV1D-37	A0A075B6S9	117 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A0A0J9YY99	117 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	FAM240B	A0A1B0GVZ2	78 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	CRYM-AS1	A6NIL9	109 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ZNF98	A6NK75	572 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461		H3BNG1	76 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	CRX	O43186	299 aa	Predicted RBP	4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	HPGDS	O60760	199 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ATP6V1G1	O75348	118 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ANXA3	P12429	323 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RPL7	P18124	248 aa	Known RBP	4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ELK1	P19419	428 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ORM2	P19652	201 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TGFBR1	P36897	503 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LINC01547	P58512	204 aa	Predicted RBP	4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	FCN2	Q15485	313 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	STEAP1B	Q6NZ63	245 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LYPD1	Q8N2G4	141 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TMEM229B	Q8NBD8	167 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	OR1S1	Q8NH92	325 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LHFPL5	Q8TAF8	219 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LRRC20	Q8TCA0	184 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TMEM263	Q8WUH6	116 aa	Known RBP	4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SGK494	Q96LW2	274 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PRRT1	Q99946	306 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RBKS	Q9H477	322 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TREM1	Q9NP99	234 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	NOP10	Q9NPE3	64 aa	Known RBP	4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	MTFP1	Q9UDX5	166 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RNF24	Q9Y225	148 aa		4.64	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A0A087WXM4	84 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A0A0B4J2A0	478 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A0A0U1RRA0	63 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PLAC8L1	A1L4L8	177 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SNURFL	B1AK76	121 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461		H7BYZ3	331 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ZNF701	M0R085	212 aa	Predicted RBP	4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PRM2	P04554	102 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	AZU1	P20160	251 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	MT3	P25713	68 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LINC00315	P59091	139 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	MRPS10	P82664	201 aa	Known RBP	4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	AKR1C1	Q04828	323 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SSBP1	Q04837	148 aa	Known RBP	4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	STX12	Q86Y82	276 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RNF182	Q8N6D2	247 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	OR8A1	Q8NGG7	326 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	OR4D10	Q8NGI6	311 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	MITD1	Q8WV92	249 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	C18orf15	Q96N68	181 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	CIB3	Q96Q77	187 aa	Predicted RBP	4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	C20orf144	Q9BQM9	153 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SHPK	Q9UHJ6	478 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	AGRN	O00468	2067 aa		4.63	□□□□□ -1.67
CEACAM1-208	ENST00000403461	APOB	P04114	4563 aa	Known RBP	4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TRGV2	A0A075B6R0	118 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TRAV9-2	A0A087WT02	112 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	MED6	O75586	246 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	POLR2G	P62487	172 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SPCS2	Q15005	226 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ESRG	Q1W209	222 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ERAS	Q7Z444	233 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	NRARP	Q7Z6K4	114 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	STPG4	Q8N801	248 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	THAP8	Q8NA92	274 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	YIPF6	Q96EC8	236 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SCP2D1	Q9UJQ7	156 aa		4.62	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TRAV8-2	A0A0B4J237	113 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	DUXB	A0A1W2PPF3	345 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SMIM1	B2RUZ4	78 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461		H3BRN7	92 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SIVA1	O15304	175 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	HYPM	O75409	117 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TSHB	P01222	138 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	IL5	P05113	134 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms