RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 CXorf1O96002 111 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 CNN1P51911 297 aaKnown RBP8.9□□□□□ -0.98
SKA3-203ENST00000400018 PROK1P58294 105 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 FOXE3Q13461 319 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 KRTAP24-1Q3LI83 254 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 DPPA3Q6W0C5 159 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 SHANK2-AS3Q9BTD1 123 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 CST9LQ9H4G1 147 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 COX11Q9Y6N1 276 aa8.9□□□□□ -0.98
SKA3-203ENST00000400018 NDUFB4O95168 129 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 RIPPLY3P57055 190 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 PNRC1Q12796 327 aaPredicted RBP8.89□□□□□ -0.99
SKA3-203ENST00000400018 ADIRFQ15847 76 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 ADAMTSL5Q6ZMM2 481 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 ZNF738Q8NE65 137 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 OR1L4Q8NGR5 311 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 USMG5Q96IX5 58 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 A0A0G2JLM5 398 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 LGALS1P09382 135 aaKnown RBP8.89□□□□□ -0.99
SKA3-203ENST00000400018 NBEAP1P0C6P0 100 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 Q6ZWC4 215 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 TEX29Q8N6K0 151 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 PGPA6NDG6 321 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 BUB3O43684 328 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 GALR1P47211 349 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 HINT1P49773 126 aaPredicted RBP8.89□□□□□ -0.99
SKA3-203ENST00000400018 ACTL10Q5JWF8 245 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 PYGO2Q9BRQ0 406 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 LAMTOR2Q9Y2Q5 125 aa8.89□□□□□ -0.99
SKA3-203ENST00000400018 TRAV30A0A087WSZ9 112 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 ELANEP08246 267 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 PRR31Q5SQ13 230 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 RHPN1-AS1Q9BWJ2 59 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 TMEM213A2RRL7 107 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 ADARB2-AS1A8MUL3 147 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 F6UB75 175 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
SKA3-203ENST00000400018 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
SKA3-203ENST00000400018 OR1N2Q8NGR9 330 aa8.88□□□□□ -0.99
SKA3-203ENST00000400018 WIPF2Q8TF74 440 aaPredicted RBP8.88□□□□□ -0.99
SKA3-203ENST00000400018 TRBV20OR9-2A0A075B6H5 130 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 IZUMO1RA6ND01 250 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 PRAC2D3DTV9 90 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 MRPS12O15235 138 aaKnown RBP8.87□□□□□ -0.99
SKA3-203ENST00000400018 PSMB3P49720 205 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 MYOZ3Q8TDC0 251 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 DPF1Q92782 380 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 CTDSP1Q9GZU7 261 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 KCNIP2Q9NS61 270 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 ANK2Q01484 3957 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 ZNF785A8K8V0 405 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 J3KRW8 73 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 HBE1P02100 147 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 PLP1P60201 277 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 Q6ZN92 141 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 STXBP6Q8NFX7 210 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 METTL26Q96S19 204 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 TXN2Q99757 166 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 Q9H3A6 140 aa8.87□□□□□ -0.99
SKA3-203ENST00000400018 TRAV1-1A0A0B4J248 108 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 VAMP3Q15836 100 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 CFAP161Q6P656 301 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 Q6ZQT7 251 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 IGKV2-40A0A087WW87 121 aaPredicted RBP8.86□□□□□ -0.99
SKA3-203ENST00000400018 GRIFINA4D1Z8 144 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 H3BUA1 57 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 IGKV2D-40P01614 121 aaPredicted RBP8.86□□□□□ -0.99
SKA3-203ENST00000400018 HNRNPA3P51991 378 aaKnown RBP8.86□□□□□ -0.99
SKA3-203ENST00000400018 KLK9Q2XQG4 91 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 GPHB5Q86YW7 130 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 TMEM190Q8WZ59 177 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 KLK9Q9UKQ9 250 aa8.86□□□□□ -0.99
SKA3-203ENST00000400018 H7BYZ3 331 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 CCL24O00175 119 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 SLC25A5P05141 298 aaKnown RBP8.85□□□□□ -0.99
SKA3-203ENST00000400018 IGLC2P0DOY2 106 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 TAS2R45P59539 299 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 ERCC8Q13216 396 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 Q8TAT8 98 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 C20orf173Q96LM9 149 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 PARLQ9H300 379 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 IGKV3-20P01619 116 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 SCGB2A2Q13296 93 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 PQLC2Q6ZP29 291 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 BPIFA4PQ86YQ2 179 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 OR2D3Q8NGH3 330 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 CMTM2Q8TAZ6 248 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 MANBALQ9NQG1 85 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 CMYA5Q8N3K9 4069 aa8.85□□□□□ -0.99
SKA3-203ENST00000400018 NDUFA4O00483 81 aa8.84□□□□□ -0.99
SKA3-203ENST00000400018 CHEK1O14757 476 aa8.84□□□□□ -0.99
SKA3-203ENST00000400018 SPATA45Q537H7 98 aa8.84□□□□□ -0.99
SKA3-203ENST00000400018 GOLT1AQ6ZVE7 132 aa8.84□□□□□ -0.99
SKA3-203ENST00000400018 MRPL32Q9BYC8 188 aaKnown RBP8.84□□□□□ -0.99
SKA3-203ENST00000400018 TRBV19A0A075B6N1 114 aa8.84□□□□□ -0.99
SKA3-203ENST00000400018 LINC01619G3V211 115 aa8.84□□□□□ -0.99
SKA3-203ENST00000400018 ISLRO14498 428 aa8.84□□□□□ -0.99
SKA3-203ENST00000400018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms