RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CD7P09564 240 aa11□□□□□ -0.65
SCAF4-202ENST00000399804 SPATA45Q537H7 98 aa11□□□□□ -0.65
SCAF4-202ENST00000399804 C5orf56Q8N8D9 126 aa11□□□□□ -0.65
SCAF4-202ENST00000399804 SMIM12Q96EX1 92 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 C8orf49Q96NF6 230 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 LY6LH3BQJ8 138 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 H3BVH4 76 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
SCAF4-202ENST00000399804 GP9P14770 177 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 HLA-DMBP28068 263 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 C18orf15Q96N68 181 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 TMEM70Q9BUB7 260 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 NUDT3O95989 172 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 TYMSP04818 313 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 DGAT2L7PQ6IED9 249 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 MRPL27Q9P0M9 148 aaKnown RBP10.99□□□□□ -0.65
SCAF4-202ENST00000399804 C1orf194Q5T5A4 169 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 NIT1Q86X76 327 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 TMEM75Q8N9X5 138 aa10.99□□□□□ -0.65
SCAF4-202ENST00000399804 LINC00614P0C842 121 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 PLP1P60201 277 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 OR10J3Q5JRS4 329 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 C8orf86Q6ZUL3 223 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 KLHL30-AS1Q8NEE0 82 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 ZNF502Q8TBZ5 544 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 ARMS2P0C7Q2 107 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 ZNF56Q15929 161 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 RASL11AQ6T310 242 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 WDFY3Q8IZQ1 3526 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 NDUFA4O00483 81 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 FAM231DQ6ZW35 169 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 ZNF503Q96F45 646 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 ZNF492Q9P255 531 aa10.98□□□□□ -0.65
SCAF4-202ENST00000399804 LINC01548A6NM66 108 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 LINC00477Q96M19 166 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 PRR25Q96S07 402 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 F2Z2F3 143 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 CRYGBP07316 175 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 PTTG1IPP53801 180 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 ZNF843Q8N446 348 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 NBEAQ8NFP9 2946 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 VGLL1Q99990 258 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 SNHG12Q9BXW3 62 aa10.97□□□□□ -0.65
SCAF4-202ENST00000399804 CBY3A6NI87 242 aa10.96□□□□□ -0.65
SCAF4-202ENST00000399804 C2orf88Q9BSF0 95 aa10.96□□□□□ -0.65
SCAF4-202ENST00000399804 NUTF2P61970 127 aaKnown RBP10.96□□□□□ -0.65
SCAF4-202ENST00000399804 ZC2HC1AQ96GY0 325 aa10.96□□□□□ -0.65
SCAF4-202ENST00000399804 FREM2Q5SZK8 3169 aa10.96□□□□□ -0.66
SCAF4-202ENST00000399804 DUSP14O95147 198 aaKnown RBP10.96□□□□□ -0.66
SCAF4-202ENST00000399804 NCR2O95944 276 aa10.96□□□□□ -0.66
SCAF4-202ENST00000399804 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
SCAF4-202ENST00000399804 VPREB3Q9UKI3 123 aa10.95□□□□□ -0.66
SCAF4-202ENST00000399804 NMUP48645 174 aa10.95□□□□□ -0.66
SCAF4-202ENST00000399804 LBHQ53QV2 105 aaPredicted RBP10.95□□□□□ -0.66
SCAF4-202ENST00000399804 D6R8Y8 96 aa10.95□□□□□ -0.66
SCAF4-202ENST00000399804 EVI2AP22794 236 aa10.95□□□□□ -0.66
SCAF4-202ENST00000399804 BCL6BQ8N143 479 aaPredicted RBP10.95□□□□□ -0.66
SCAF4-202ENST00000399804 JMJD8Q96S16 334 aa10.95□□□□□ -0.66
SCAF4-202ENST00000399804 PMCHL2Q9BQD1 86 aa10.94□□□□□ -0.66
SCAF4-202ENST00000399804 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
SCAF4-202ENST00000399804 AMN1Q8IY45 258 aa10.94□□□□□ -0.66
SCAF4-202ENST00000399804 LINC01587Q99440 93 aa10.94□□□□□ -0.66
SCAF4-202ENST00000399804 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
SCAF4-202ENST00000399804 CT83Q5H943 113 aa10.94□□□□□ -0.66
SCAF4-202ENST00000399804 SMIM27A0A1W2PRY6 76 aa10.94□□□□□ -0.66
SCAF4-202ENST00000399804 LTAP01374 205 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 VAMP3Q15836 100 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 PYGO2Q9BRQ0 406 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 GFRA4Q9GZZ7 299 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 ACANP16112 2415 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 TMEM213A2RRL7 107 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 OR4C46A6NHA9 309 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 SLAQ13239 276 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 UQCR10Q9UDW1 63 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 NUPR1O60356 82 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 PPBPP02775 128 aa10.93□□□□□ -0.66
SCAF4-202ENST00000399804 FAM231BA6NCW3 169 aa10.92□□□□□ -0.66
SCAF4-202ENST00000399804 BUB3O43684 328 aa10.92□□□□□ -0.66
SCAF4-202ENST00000399804 LEPP41159 167 aa10.92□□□□□ -0.66
SCAF4-202ENST00000399804 CENPEQ02224 2701 aa10.92□□□□□ -0.66
SCAF4-202ENST00000399804 FN1P02751 2386 aaKnown RBP10.92□□□□□ -0.66
SCAF4-202ENST00000399804 WI2-2373I1.2A0A1W2PRP0 233 aa10.92□□□□□ -0.66
SCAF4-202ENST00000399804 H3BUA1 57 aa10.92□□□□□ -0.66
SCAF4-202ENST00000399804 RPLP1P05386 114 aaKnown RBP10.92□□□□□ -0.66
SCAF4-202ENST00000399804 TMEM97Q5BJF2 176 aa10.92□□□□□ -0.66
SCAF4-202ENST00000399804 AKAP13Q12802 2813 aa10.92□□□□□ -0.66
SCAF4-202ENST00000399804 DSPP15924 2871 aaKnown RBP10.91□□□□□ -0.66
SCAF4-202ENST00000399804 ELANEP08246 267 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 EBI3Q14213 229 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 RRN3P1Q2M238 152 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 Q71RC1 249 aaPredicted RBP10.91□□□□□ -0.66
SCAF4-202ENST00000399804 POLR3KQ9Y2Y1 108 aaPredicted RBP10.91□□□□□ -0.66
SCAF4-202ENST00000399804 FAM181BA6NEQ2 426 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 SMKR1H3BMG3 65 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 IGHG2P01859 326 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 FXYD7P58549 80 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 TDRG1Q3Y452 100 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 STHQ8IWL8 128 aa10.91□□□□□ -0.66
SCAF4-202ENST00000399804 IGHV7-4-1A0A0J9YVY3 117 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms