RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 STPG1Q5TH74 334 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 DEFB132Q7Z7B7 95 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 TRAV23DV6A0A075B6W5 121 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 DAZ1Q9NQZ3 744 aaKnown RBP7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 RPL35AP18077 110 aaKnown RBP7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 HIST2H2BCQ6DN03 193 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 HIST2H2BDQ6DRA6 164 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 PTH2Q96A98 100 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV4OR15-8A0A075B7B6 117 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 A0A087WW49 117 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 IGKV3D-7A0A0C4DH55 119 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 ZNF525Q8N782 197 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 ICOSQ9Y6W8 199 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV1OR21-1A0A087WYE8 117 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 SH2D1AO60880 128 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 C2orf66Q6UXQ4 117 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV3-11P01762 117 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 LGALS9BQ3B8N2 356 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 LGALS9CQ6DKI2 356 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 MRPL14Q6P1L8 145 aaKnown RBP7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 SLC25A47Q6Q0C1 308 aa7.03□□□□□ -1.28
CACNA1C-220ENST00000399655 ZFYVE26Q68DK2 2539 aa7.02□□□□□ -1.28
CACNA1C-220ENST00000399655 HGFACQ04756 655 aa7.02□□□□□ -1.28
CACNA1C-220ENST00000399655 PCOLCEQ15113 449 aa7.02□□□□□ -1.28
CACNA1C-220ENST00000399655 C14orf177Q52M58 125 aa7.02□□□□□ -1.28
CACNA1C-220ENST00000399655 UBE2D2P62837 147 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 BMPERQ8N8U9 685 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 MARF1Q9Y4F3 1742 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 NXPH4O95158 308 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 TM2D2Q9BX73 214 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 CICQ96RK0 1608 aaPredicted RBP7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 LRRK2Q5S007 2527 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 LINC00643Q86TS7 51 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 NANOS2P60321 138 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 NMSQ5H8A3 153 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 FAM60AQ9NP50 221 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 PLA2G2AP14555 144 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 TM2D1Q9BX74 207 aa7.02□□□□□ -1.29
CACNA1C-220ENST00000399655 K7ENP7 123 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 MINOS1Q5TGZ0 78 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 MINOS1-NBL1R4GNA1 71 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 A4D1N5 150 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 PPIFP30405 207 aaKnown RBP7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 CR1LQ2VPA4 569 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 LEAP2Q969E1 77 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 PTPRBP23467 1997 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 NDUFV3P56181 108 aaKnown RBP7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 TMEM61Q8N0U2 210 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 TRBV5-3A0A0A0MS03 114 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 TMEM133Q9H2Q1 129 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 SIPA1L3O60292 1781 aaPredicted RBP7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 TIMM17BO60830 172 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 DKK2Q9UBU2 259 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 IGHV5-51A0A0C4DH38 117 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 IGHMP01871 453 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 CBLN3Q6UW01 205 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 ZCCHC24Q8N2G6 241 aaKnown RBP7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 A0A0G2JMZ2 1700 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 LRRC37A2A6NM11 1700 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 LRRC37AA6NMS7 1700 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 PMS2P5A8MQ11 134 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 C20orf78Q9BR46 151 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 C1QTNF5Q9BXJ0 243 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 RNF152Q8N8N0 203 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 DEFB124Q8NES8 71 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 PDLIM7Q9NR12 457 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 WBP1Q96G27 269 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 IGKV2-40A0A087WW87 121 aaPredicted RBP7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 GREM1O60565 184 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 IGKV2D-40P01614 121 aaPredicted RBP7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 TMEM254Q8TBM7 123 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 UCN2Q96RP3 112 aa7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 NYNRINQ9P2P1 1898 aaKnown RBP7.01□□□□□ -1.29
CACNA1C-220ENST00000399655 A0A087WWL8 130 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 IGHV1-45A0A0A0MS14 117 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 C3orf56Q8N813 242 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 NDUFB8O95169 186 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 IMUPQ9GZP8 106 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 TRAV4A0A0B4J268 109 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 C18orf12Q96KH6 178 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 Q6ZT83 130 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 IGKV2D-24A0A075B6R9 120 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 IFI6P09912 130 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 COX14Q96I36 57 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 S4R3C0 116 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 IGKV6D-21A0A0A0MT36 114 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 IGHV3-53P01767 116 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 SLC25A45Q8N413 288 aa7□□□□□ -1.29
CACNA1C-220ENST00000399655 CELA2AP08217 269 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 CCL4L1Q8NHW4 92 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 SELENOKQ9Y6D0 94 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 HIVEP2P31629 2446 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 SEM1Q6ZVN7 128 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 C12orf74Q32Q52 190 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 RICTORQ6R327 1708 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 DIRC1Q969H9 104 aa6.99□□□□□ -1.29
CACNA1C-220ENST00000399655 POLQO75417 2590 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms