RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 IL36BQ9NZH7 164 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 DEFB136Q30KP8 78 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 SLC25A48Q6ZT89 311 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 EXOC3-AS1Q8N2X6 119 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 FGFBP3Q8TAT2 258 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 CSTL1Q9H114 145 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 IGLV3-12A0A075B6K2 115 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 ADAMTSL5Q6ZMM2 481 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 RPRMLQ8N4K4 120 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 MRPL23Q16540 153 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 LAMTOR2Q9Y2Q5 125 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 C14orf178Q8N769 122 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 Q8TAT8 98 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 C1orf194Q5T5A4 169 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 BCL6BQ8N143 479 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 TMEM243Q9BU79 118 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 UBL5Q9BZL1 73 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 BRCA1P38398 1863 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 VCYO14598 125 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 C18orf12Q96KH6 178 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 NOP10Q9NPE3 64 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 VPREB3Q9UKI3 123 aa8.87□□□□□ -0.99
CACNA1C-216ENST00000399638 H0Y9J4 135 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 ZNRF2Q8NHG8 242 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 RNF144BQ7Z419 303 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 PAQR4Q8N4S7 273 aaPredicted RBP8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 IFI27L1Q96BM0 104 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 AGMATQ9BSE5 352 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 TIMM21Q9BVV7 248 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 VOPP1Q96AW1 172 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 G3V318 75 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 DLEU1O43261 78 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 VSIRQ9H7M9 311 aa8.86□□□□□ -0.99
CACNA1C-216ENST00000399638 IZUMO1RA6ND01 250 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 RHODO00212 210 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 CD177Q8N6Q3 437 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 ICOSQ9Y6W8 199 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 CACNA1AO00555 2505 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 IGHV4-30-4P0DP06 118 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 IGHV4-31P0DP07 118 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 GTSF1Q8WW33 167 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 ESM1Q9NQ30 184 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 PLXNA3P51805 1871 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 IGHV4-30-2A0A087WSY4 118 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 A0A1B0GWJ7 208 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 RNF5Q99942 180 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 SPART-AS1P0CW21 52 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 C8orf49Q96NF6 230 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 ACACBO00763 2458 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 BUB3O43684 328 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 SLAQ13239 276 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 SCN10AQ9Y5Y9 1956 aa8.85□□□□□ -0.99
CACNA1C-216ENST00000399638 SHISA9B4DS77 424 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 LYPD6BQ8NI32 183 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 MYO18BQ8IUG5 2567 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 RNASE2P10153 161 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 NEGR1Q7Z3B1 354 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 U3KQE9 123 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 MED13LQ71F56 2210 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 PRSS57Q6UWY2 283 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 TMEM14BQ9NUH8 114 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 RLFQ13129 1914 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 RALGAPA1Q6GYQ0 2036 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 D6R8Y8 96 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 H0YJW9 148 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 NDUFC2O95298 119 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 GGNQ86UU5 652 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 CRYBA4P53673 196 aa8.84□□□□□ -0.99
CACNA1C-216ENST00000399638 SRRM5B3KS81 715 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 C9orf47Q6ZRZ4 202 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 TM2D2Q9BX73 214 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 FAM208BQ5VWN6 2430 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 DOCK4Q8N1I0 1966 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 LY6G6CO95867 125 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 ZNF664Q8N3J9 261 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 USF3Q68DE3 2245 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 MYMXA0A1B0GTQ4 84 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 PROP1O75360 226 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 PLEKHB2Q96CS7 222 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 GNB1LQ9BYB4 327 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 GUSBP1Q15486 140 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 TMEM190Q8WZ59 177 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 PCNX1Q96RV3 2341 aa8.83□□□□□ -1
CACNA1C-216ENST00000399638 WIPF2Q8TF74 440 aaPredicted RBP8.83□□□□□ -1
CACNA1C-216ENST00000399638 SH2D1AO60880 128 aa8.82□□□□□ -1
CACNA1C-216ENST00000399638 FAM231DQ6ZW35 169 aa8.82□□□□□ -1
CACNA1C-216ENST00000399638 FNDC1Q4ZHG4 1894 aaPredicted RBP8.82□□□□□ -1
CACNA1C-216ENST00000399638 INAFM1C9JVW0 142 aa8.82□□□□□ -1
CACNA1C-216ENST00000399638 IFITM1P13164 125 aa8.82□□□□□ -1
CACNA1C-216ENST00000399638 TRPT1Q86TN4 253 aaKnown RBP8.82□□□□□ -1
CACNA1C-216ENST00000399638 IGHV1OR15-1A0A075B7D0 117 aa8.82□□□□□ -1
CACNA1C-216ENST00000399638 CD55P08174 381 aa8.82□□□□□ -1
CACNA1C-216ENST00000399638 MED12Q93074 2177 aa8.81□□□□□ -1
CACNA1C-216ENST00000399638 IGHV4-61A0A0C4DH41 118 aa8.81□□□□□ -1
CACNA1C-216ENST00000399638 WDR81Q562E7 1941 aa8.81□□□□□ -1
CACNA1C-216ENST00000399638 ETDCA0A1B0GVM5 59 aa8.81□□□□□ -1
CACNA1C-216ENST00000399638 NDUFB8O95169 186 aa8.81□□□□□ -1
CACNA1C-216ENST00000399638 XCL1P47992 114 aa8.81□□□□□ -1
CACNA1C-216ENST00000399638 SLURP1P55000 103 aa8.81□□□□□ -1
CACNA1C-216ENST00000399638 DEFB4AO15263 64 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms