RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 A0A096LPF7 62 aa6.28□□□□□ -1.4
USP47-203ENST00000399455 TRBV19A0A075B6N1 114 aa6.28□□□□□ -1.4
USP47-203ENST00000399455 TNFRSF13BO14836 293 aaPredicted RBP6.28□□□□□ -1.4
USP47-203ENST00000399455 KIF26BQ2KJY2 2108 aa6.28□□□□□ -1.4
USP47-203ENST00000399455 PUSL1Q8N0Z8 303 aaKnown RBP6.28□□□□□ -1.4
USP47-203ENST00000399455 WFDC11Q8NEX6 87 aa6.28□□□□□ -1.4
USP47-203ENST00000399455 ANAPC10Q9UM13 185 aa6.28□□□□□ -1.4
USP47-203ENST00000399455 IGLL5B9A064 214 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 C19orf84I3L1E1 186 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 C11orf45Q8TAV5 145 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 AGMATQ9BSE5 352 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 RBAKDNA6NC62 111 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 PGPEP1LA6NFU8 196 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 TIRAPP58753 221 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 OCC1Q8TAD7 63 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 NOTCH4Q99466 2003 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 PRIMA1Q86XR5 153 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 U3KQE9 123 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 DNAJC30Q96LL9 226 aa6.27□□□□□ -1.41
USP47-203ENST00000399455 APRG1Q8IVJ8 170 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 FREM3P0C091 2139 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 ATXN8Q156A1 80 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 ANXA2RQ3ZCQ2 193 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 C4orf48Q5BLP8 95 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 SNHG12Q9BXW3 62 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 RP1L1Q8IWN7 2480 aaPredicted RBP6.26□□□□□ -1.41
USP47-203ENST00000399455 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 RPL18AQ02543 176 aaKnown RBP6.26□□□□□ -1.41
USP47-203ENST00000399455 WFDC1Q9HC57 220 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 ZNF492Q9P255 531 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 KMT2EQ8IZD2 1858 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 A0A0U1RRA0 63 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 NCR2O95944 276 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 ZNF503Q96F45 646 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 NDUFAF3Q9BU61 184 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 A6NDX4 124 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 C2orf70A6NJV1 201 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 PRSS46E5RG02 174 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 LINC00205P59089 165 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 KLF5Q13887 457 aaPredicted RBP6.26□□□□□ -1.41
USP47-203ENST00000399455 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 SIRPDQ9H106 197 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
USP47-203ENST00000399455 TRAV1-1A0A0B4J248 108 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 PMVKQ15126 192 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 SEM1Q6ZVN7 128 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 DENND4CQ5VZ89 1909 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 K7EMT4 169 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 K7EQD1 137 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 NIT1Q86X76 327 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 CFHR4Q92496 578 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 PLXNB3Q9ULL4 1909 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 ADMP35318 185 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 IGLV2-23P01705 113 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 SFTA2Q6UW10 78 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 ATOH7Q8N100 152 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 IGHV7-81A0A0B4J1V7 117 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 PRB4P10163 310 aaPredicted RBP6.25□□□□□ -1.41
USP47-203ENST00000399455 GYPEP15421 78 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 CFPP27918 469 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 PLP1P60201 277 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 VSIRQ9H7M9 311 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 TMEM242Q9NWH2 141 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 IGKV1-39P01597 117 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 IGKV1D-39P04432 117 aa6.25□□□□□ -1.41
USP47-203ENST00000399455 BCL6BQ8N143 479 aaPredicted RBP6.25□□□□□ -1.41
USP47-203ENST00000399455 RNF222A6NCQ9 220 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 DIAPH2-AS1Q14236 149 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 AJUBAQ96IF1 538 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 A8MXK9 166 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 BLCAPP62952 87 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 HERVK_113P63121 156 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 KRTAP27-1Q3LI81 207 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 GPHB5Q86YW7 130 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 MRPL36Q9P0J6 103 aaKnown RBP6.24□□□□□ -1.41
USP47-203ENST00000399455 MMP23AO75900 390 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 IGHG2P01859 326 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 RNF138Q8WVD3 245 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 LENEPQ9Y5L5 61 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 NPC2P61916 151 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 FHL1Q13642 323 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 IGFBPL1Q8WX77 278 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 C20orf144Q9BQM9 153 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 DEFB135Q30KP9 77 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 ZNF491Q8N8L2 437 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 MBD6Q96DN6 1003 aa6.24□□□□□ -1.41
USP47-203ENST00000399455 H3BMM0 161 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 HLA-DRB4P13762 266 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 Q6ZQT7 251 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 ATP6V0E2Q8NHE4 81 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 UBE2WQ96B02 151 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 SIGLEC8Q9NYZ4 499 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 ZNF581Q9P0T4 197 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 ERG28Q9UKR5 140 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 HLA-DRB4X5D2U9 266 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 DAZ2Q13117 558 aaKnown RBP6.23□□□□□ -1.41
USP47-203ENST00000399455 DAZ4Q86SG3 579 aaKnown RBP6.23□□□□□ -1.41
USP47-203ENST00000399455 VOPP1Q96AW1 172 aa6.23□□□□□ -1.41
USP47-203ENST00000399455 CHAC1Q9BUX1 264 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms