RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SMIM3Q9BZL3 60 aa10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 NOP10Q9NPE3 64 aaKnown RBP10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 C7orf71A4D174 169 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 J3KRW8 73 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 OR7C2O60412 319 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 OR10J4P0C629 311 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 TAS2R45P59539 299 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 ERCC8Q13216 396 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 KHDC3LQ587J8 217 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 TMEM78Q5T7P6 136 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 UBE2DNLQ8IWF7 75 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 ZNF503Q96F45 646 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 PHYHIPLQ96FC7 376 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
SMIM11A-203ENST00000399299 IGKV2-40A0A087WW87 121 aaPredicted RBP10.46□□□□□ -0.73
SMIM11A-203ENST00000399299 SNURFLB1AK76 121 aa10.46□□□□□ -0.73
SMIM11A-203ENST00000399299 IGKV2D-40P01614 121 aaPredicted RBP10.46□□□□□ -0.73
SMIM11A-203ENST00000399299 UBE2L3P68036 154 aaKnown RBP10.46□□□□□ -0.73
SMIM11A-203ENST00000399299 FAM122CQ6P4D5 195 aa10.46□□□□□ -0.73
SMIM11A-203ENST00000399299 MED28Q9H204 178 aa10.46□□□□□ -0.73
SMIM11A-203ENST00000399299 WFDC1Q9HC57 220 aa10.46□□□□□ -0.73
SMIM11A-203ENST00000399299 HECTD4Q9Y4D8 3996 aa10.46□□□□□ -0.73
SMIM11A-203ENST00000399299 NACAE9PAV3 2078 aa10.46□□□□□ -0.74
SMIM11A-203ENST00000399299 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 F5H768 121 aa10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 ZNF324O75467 553 aaPredicted RBP10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 DAZ2Q13117 558 aaKnown RBP10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 LGALS9BQ3B8N2 356 aa10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 ZFAND2AQ8N6M9 145 aa10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 ZNF680Q8NEM1 530 aa10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 ASB13Q8WXK3 278 aa10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 VGLL1Q99990 258 aa10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
SMIM11A-203ENST00000399299 DNAH2Q9P225 4427 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 RBAKDNA6NC62 111 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 GPX1P07203 203 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 M6PRP20645 277 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 CSN1S1P47710 185 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 FAM3BP58499 235 aaPredicted RBP10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 CD300CQ08708 224 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 BTN1A1Q13410 526 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 ACOT6Q3I5F7 207 aaPredicted RBP10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 ANXA2RQ3ZCQ2 193 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 LINC00336Q6ZUF6 198 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 Q9H3A6 140 aa10.44□□□□□ -0.74
SMIM11A-203ENST00000399299 ZNF138P52744 262 aa10.43□□□□□ -0.74
SMIM11A-203ENST00000399299 RANP62826 216 aaKnown RBP10.43□□□□□ -0.74
SMIM11A-203ENST00000399299 ZNF266Q14584 549 aa10.43□□□□□ -0.74
SMIM11A-203ENST00000399299 EIF4E3Q8N5X7 224 aaKnown RBP10.43□□□□□ -0.74
SMIM11A-203ENST00000399299 AQP10Q96PS8 301 aa10.43□□□□□ -0.74
SMIM11A-203ENST00000399299 GIPP09681 153 aaPredicted RBP10.42□□□□□ -0.74
SMIM11A-203ENST00000399299 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
SMIM11A-203ENST00000399299 PQLC2Q6ZP29 291 aa10.42□□□□□ -0.74
SMIM11A-203ENST00000399299 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
SMIM11A-203ENST00000399299 LENEPQ9Y5L5 61 aa10.42□□□□□ -0.74
SMIM11A-203ENST00000399299 DNAH17Q9UFH2 4485 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 A0A1W2PPV4 95 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 GAGE12BA1L429 117 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 GAGE7O76087 117 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 GAGE12FP0CL80 117 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 GAGE12GP0CL81 117 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 GAGE12IP0CL82 117 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 RAB2AP61019 212 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 IBA57Q5T440 356 aaKnown RBP10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 PRR9Q5T870 116 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 Q6ZR54 194 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 ARL6IP6Q8N6S5 226 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 OR2G3Q8NGZ4 309 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 RXFP4Q8TDU9 374 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 PSMG3Q9BT73 122 aaPredicted RBP10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
SMIM11A-203ENST00000399299 DIRC3C9JPN6 131 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 M0R2N4 97 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 NUDT3O95989 172 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 TCL1AP56279 114 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 Q6ZTI0 123 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 OR10G4Q8NGN3 311 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 OR10G9Q8NGN4 311 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 OR10G7Q8NGN6 311 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 Q8TAT8 98 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 TMED6Q8WW62 240 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 ATG101Q9BSB4 218 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 GSN-AS1Q9NRJ2 163 aa10.4□□□□□ -0.74
SMIM11A-203ENST00000399299 FAT2Q9NYQ8 4349 aa10.39□□□□□ -0.75
SMIM11A-203ENST00000399299 IGLV2-18A0A075B6J9 118 aa10.39□□□□□ -0.75
SMIM11A-203ENST00000399299 IGHV1OR15-1A0A075B7D0 117 aa10.39□□□□□ -0.75
SMIM11A-203ENST00000399299 H3BNG1 76 aa10.39□□□□□ -0.75
SMIM11A-203ENST00000399299 RGS13O14921 159 aa10.39□□□□□ -0.75
SMIM11A-203ENST00000399299 FAM74A1Q5RGS3 127 aa10.39□□□□□ -0.75
SMIM11A-203ENST00000399299 TRAV26-1A0A087WT03 109 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 RTL8CO15255 209 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 EIF3GO75821 320 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 HOXA5P20719 270 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 ATP6V0CP27449 155 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 CCL18P55774 89 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 SERF2P84101 59 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 OR5I1Q13606 314 aa10.38□□□□□ -0.75
SMIM11A-203ENST00000399299 Q5BKY6 102 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms