RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGHV3OR16-13A0A075B7E8 117 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV3-74A0A0B4J1X5 117 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 SPAARA0A1B0GVQ0 90 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 OVOL3O00110 214 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 CD40P25942 277 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 SIGLEC15Q6ZMC9 328 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 PPP1R27Q86WC6 154 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 AAMDCQ9H7C9 122 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 SIGLEC9Q9Y336 463 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 AGRNO00468 2067 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 ASH1LQ9NR48 2969 aaKnown RBP7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 TRAV17A0A0B4J275 112 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 CRYGCP07315 174 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 INSL3P51460 131 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 RELNP78509 3460 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 LRBAP50851 2863 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 IGLV3-9A0A075B6K5 115 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 TRAV40A0A0B4J280 105 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 NDUFA3O95167 84 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 EGR2P11161 476 aaPredicted RBP7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 MRGPRG-AS1Q2M3A8 158 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 VGLL1Q99990 258 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 CTSZQ9UBR2 303 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 RAI1Q7Z5J4 1906 aaPredicted RBP7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 TRBV25-1A0A075B6N4 114 aa7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV3-66A0A0C4DH42 116 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 GAGE12HA6NDE8 117 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 CD59P13987 128 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 MC5RP33032 325 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 HES1Q14469 280 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 RNF125Q96EQ8 232 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 TRAV26-2A0A0B4J265 109 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 TMEM8BA6NDV4 472 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 SPRY2O43597 315 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 ZNF80P51504 273 aaPredicted RBP7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 TMEM158Q8WZ71 300 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 ZNF479Q96JC4 524 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 HIST1H4GQ99525 98 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 J3KRW8 73 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 TCF15Q12870 199 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 RPEQ96AT9 228 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 MAP1LC3AQ9H492 121 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 DYNLRB1Q9NP97 96 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
PTCHD4-202ENST00000398738 C17orf100A8MU93 164 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV1-8P0DP01 117 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 ERCC8Q13216 396 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 MAPKAPK5-AS1Q8N8E1 139 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 SHANK2-AS3Q9BTD1 123 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 NCOR1P1Q9H4R4 102 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 CHTOPQ9Y3Y2 248 aaKnown RBP7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 WI2-2373I1.2A0A1W2PRP0 233 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 IGKCP01834 107 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 LOXP28300 417 aaPredicted RBP7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 ZNF562Q6V9R5 426 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 ZNF491Q8N8L2 437 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 LINC00574Q9H8X3 128 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV3-49A0A0A0MS15 119 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 A0A1B0GWB2 263 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 TEX22C9J3V5 150 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 TGFAP01135 160 aa7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 MRPL35Q9NZE8 188 aaKnown RBP7.73□□□□□ -1.17
PTCHD4-202ENST00000398738 INS-IGF2F8WCM5 200 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 EFNA4P52798 201 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 ADIPOQQ15848 244 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 SPAG8Q99932 426 aaPredicted RBP7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHV1-3A0A0C4DH29 117 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 C16orf97H3BN30 126 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 TMEM178BH3BS89 294 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 I3L2K1 104 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 CDX4O14627 284 aaPredicted RBP7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 FTH1P19P0C7X4 201 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 CD300EQ496F6 205 aaPredicted RBP7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 TEX36Q5VZQ5 186 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 FAM215AQ9Y5M1 114 aa7.72□□□□□ -1.17
PTCHD4-202ENST00000398738 TNFRSF6BO95407 300 aa7.71□□□□□ -1.17
PTCHD4-202ENST00000398738 RAB9AP51151 201 aa7.71□□□□□ -1.17
PTCHD4-202ENST00000398738 BSPH1Q075Z2 132 aa7.71□□□□□ -1.17
PTCHD4-202ENST00000398738 SPTAN1Q13813 2472 aaKnown RBP7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 A0A1B0GW15 77 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 J3QR89 54 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CEACAM3P40198 252 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 SCGB2A2Q13296 93 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 Q6AWC8 147 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CFAP161Q6P656 301 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 TNFRSF14Q92956 283 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 HHLA3Q9XRX5 114 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CYSLTR1Q9Y271 337 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 IGLL5B9A064 214 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 K7EIM0 57 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 SIVA1O15304 175 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 NBL1P41271 181 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CKS1BP61024 79 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CCDC144NLQ6NUI1 221 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 CEND1Q8N111 149 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 C20orf78Q9BR46 151 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.18
PTCHD4-202ENST00000398738 H3BRN7 92 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 PRRG2O14669 202 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms