RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 PPIFP30405 207 aaKnown RBP6.41□□□□□ -1.38
PTPRD-204ENST00000397606 FXYD7P58549 80 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 ATP5L2Q7Z4Y8 100 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 PRELID3AQ96N28 172 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 MRPL36Q9P0J6 103 aaKnown RBP6.41□□□□□ -1.38
PTPRD-204ENST00000397606 JMJD1CQ15652 2540 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 BTF3P20290 206 aaKnown RBP6.41□□□□□ -1.38
PTPRD-204ENST00000397606 IQCJQ1A5X6 159 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 C16orf54Q6UWD8 224 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 ORMDL3Q8N138 153 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 RCHY1Q96PM5 261 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 PAX2Q02962 417 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 PATE2Q6UY27 113 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 MS4A6AQ9H2W1 248 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 C2orf70A6NJV1 201 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 CA1P00915 261 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-204ENST00000397606 CDKN1BP46527 198 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 APOC4P55056 127 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 FOXI2Q6ZQN5 318 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 TMEM170AQ8WVE7 144 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 TMEM191AQ9H0A3 160 aa6.41□□□□□ -1.38
PTPRD-204ENST00000397606 COL27A1Q8IZC6 1860 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-204ENST00000397606 NUDT3O95989 172 aa6.4□□□□□ -1.38
PTPRD-204ENST00000397606 PPBPP02775 128 aa6.4□□□□□ -1.38
PTPRD-204ENST00000397606 HTN3P15516 51 aa6.4□□□□□ -1.38
PTPRD-204ENST00000397606 SPINK13Q1W4C9 94 aa6.4□□□□□ -1.38
PTPRD-204ENST00000397606 C11orf52Q96A22 123 aa6.4□□□□□ -1.38
PTPRD-204ENST00000397606 PFN1P07737 140 aaKnown RBP6.4□□□□□ -1.38
PTPRD-204ENST00000397606 FOXA3P55318 350 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-204ENST00000397606 PRR25Q96S07 402 aa6.4□□□□□ -1.38
PTPRD-204ENST00000397606 XCL2Q9UBD3 114 aa6.4□□□□□ -1.38
PTPRD-204ENST00000397606 WNK1Q9H4A3 2382 aa6.4□□□□□ -1.38
PTPRD-204ENST00000397606 TRAV25A0A0B4J276 109 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 GP9P14770 177 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 ATRAIDQ6UW56 229 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 NDUFA11Q86Y39 141 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 CCDC140Q96MF4 163 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 ZNF492Q9P255 531 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 TRGV4A0A0C4DH28 118 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 NDUFS6O75380 124 aaKnown RBP6.4□□□□□ -1.39
PTPRD-204ENST00000397606 ADMP35318 185 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 NIT2Q9NQR4 276 aa6.4□□□□□ -1.39
PTPRD-204ENST00000397606 CD28P10747 220 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 PAPPA-AS1Q5QFB9 102 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 AP5S1Q9NUS5 200 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 LENEPQ9Y5L5 61 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 C7orf71A4D174 169 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 C17orf77Q96MU5 243 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 GZMBP10144 247 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 INSL3P51460 131 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 OR10AG1Q8NH19 301 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 ZNF702PQ9H963 129 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 RBAKDNA6NC62 111 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 KNCNA6PVL3 124 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 LYZL1Q6UWQ5 148 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 ARL6IP6Q8N6S5 226 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 LYPD6BQ8NI32 183 aa6.39□□□□□ -1.39
PTPRD-204ENST00000397606 RAI1Q7Z5J4 1906 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-204ENST00000397606 TRBV12-3P01733 135 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 HERVK_113P61574 105 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 PACRGQ96M98 296 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-204ENST00000397606 VAMP8Q9BV40 100 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 TRBV24-1A0A075B6N3 115 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 IGKV1D-37A0A075B6S9 117 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 TRGV1A0A0A0MS02 117 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 RASL11AQ6T310 242 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 GNB1LQ9BYB4 327 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 TMEM160Q9NX00 188 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 LEPROTL1O95214 131 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 CT83Q5H943 113 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 OR10J3Q5JRS4 329 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 OR4C5Q8NGB2 326 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 SMR3AQ99954 134 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 GFRA4Q9GZZ7 299 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 FAM231BA6NCW3 169 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 C9JQL5 133 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 UNQ9165/PRO28630Q6UXU0 137 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 LINC01006Q8NI28 216 aa6.38□□□□□ -1.39
PTPRD-204ENST00000397606 ANKRD17O75179 2603 aaKnown RBP6.37□□□□□ -1.39
PTPRD-204ENST00000397606 PRSS46E5RG02 174 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 FAM167A-AS1Q96KT0 104 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 PLXNB1O43157 2135 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 IGHV1OR15-1A0A075B7D0 117 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 BATFQ16520 125 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 ASPHD1Q5U4P2 390 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 MORN5Q5VZ52 161 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 VGLL1Q99990 258 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 ST20Q9HBF5 79 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 FLNBO75369 2602 aaKnown RBP6.37□□□□□ -1.39
PTPRD-204ENST00000397606 LGALS9O00182 355 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 CRLF1O75462 422 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 PSMB8P28062 276 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 FAM231DQ6ZW35 169 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 DLX4Q92988 240 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-204ENST00000397606 C8orf49Q96NF6 230 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 PHOX2AO14813 284 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 ARMS2P0C7Q2 107 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 HLA-DMBP28068 263 aa6.37□□□□□ -1.39
PTPRD-204ENST00000397606 SSBP4Q9BWG4 385 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-204ENST00000397606 AGPAT4-IT1Q9H0P7 198 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms