RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 VGLL1Q99990 258 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 RPH3ALQ9UNE2 315 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 HBE1P02100 147 aa15.27■□□□□ 0.04
TSPAN4-206ENST00000397408 FGF8P55075 233 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-206ENST00000397408 TMEM78Q5T7P6 136 aa15.27■□□□□ 0.04
TSPAN4-206ENST00000397408 RXFP4Q8TDU9 374 aa15.27■□□□□ 0.04
TSPAN4-206ENST00000397408 PLA2G2EQ9NZK7 142 aa15.27■□□□□ 0.04
TSPAN4-206ENST00000397408 MAP1LC3B2A6NCE7 125 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 DIRC3C9JPN6 131 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 FHITP49789 147 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 PMS2P11Q13670 270 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 ZFP69Q49AA0 526 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 GFI1BQ5VTD9 330 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 C11orf45Q8TAV5 145 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 TMED6Q8WW62 240 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 MAP1LC3BQ9GZQ8 125 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 CXorf65A6NEN9 183 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 RRN3P1Q2M238 152 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 TMEM256Q8N2U0 113 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 Q8TAT8 98 aa15.26■□□□□ 0.03
TSPAN4-206ENST00000397408 RBAKDNA6NC62 111 aa15.25■□□□□ 0.03
TSPAN4-206ENST00000397408 UMAD1C9J7I0 102 aa15.25■□□□□ 0.03
TSPAN4-206ENST00000397408 NANOS2P60321 138 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-206ENST00000397408 FAM213BQ8TBF2 198 aa15.25■□□□□ 0.03
TSPAN4-206ENST00000397408 FAM19A4Q96LR4 140 aa15.25■□□□□ 0.03
TSPAN4-206ENST00000397408 LINC01587Q99440 93 aa15.25■□□□□ 0.03
TSPAN4-206ENST00000397408 TMPRSS5Q9H3S3 457 aa15.25■□□□□ 0.03
TSPAN4-206ENST00000397408 STARD9Q9P2P6 4700 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 LOC102723971A0A1B0GUV8 181 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 ZNF705GA8MUZ8 300 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 SLC25A5P05141 298 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 ZNF138P52744 262 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 EMP1P54849 157 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 GNG5P63218 68 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 GOLT1AQ6ZVE7 132 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 C9orf62Q8N4C0 152 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 ZNF492Q9P255 531 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 CSMD3Q7Z407 3707 aa15.24■□□□□ 0.03
TSPAN4-206ENST00000397408 TMEM189A5PLL7 270 aa15.23■□□□□ 0.03
TSPAN4-206ENST00000397408 GGTLC3B5MD39 225 aa15.23■□□□□ 0.03
TSPAN4-206ENST00000397408 PRM2P04554 102 aa15.23■□□□□ 0.03
TSPAN4-206ENST00000397408 C20orf144Q9BQM9 153 aa15.23■□□□□ 0.03
TSPAN4-206ENST00000397408 CELA1Q9UNI1 258 aa15.23■□□□□ 0.03
TSPAN4-206ENST00000397408 KLLNB2CW77 178 aa15.22■□□□□ 0.03
TSPAN4-206ENST00000397408 CRISP2P16562 243 aa15.22■□□□□ 0.03
TSPAN4-206ENST00000397408 C5orf17Q8NAS9 161 aa15.22■□□□□ 0.03
TSPAN4-206ENST00000397408 TRAV12-3A0A0B4J271 114 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 C7orf71A4D174 169 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 H7BYZ3 331 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 HTN1P15515 57 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 TAS2R60P59551 318 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 UBE2G2P60604 165 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 BTN1A1Q13410 526 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 DPPA3Q6W0C5 159 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 SLC51BQ86UW2 128 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 ZFAND2AQ8N6M9 145 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 ARL6IP6Q8N6S5 226 aa15.21■□□□□ 0.03
TSPAN4-206ENST00000397408 A0A1W2PRE2 83 aa15.2■□□□□ 0.02
TSPAN4-206ENST00000397408 SUMO1P63165 101 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-206ENST00000397408 EIF5AL1Q6IS14 154 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-206ENST00000397408 NIPSNAP3BQ9BS92 247 aa15.2■□□□□ 0.02
TSPAN4-206ENST00000397408 YTHDF2Q9Y5A9 579 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-206ENST00000397408 TRBV7-9A0A0J9YWB2 115 aa15.19■□□□□ 0.02
TSPAN4-206ENST00000397408 GPX1P07203 203 aa15.19■□□□□ 0.02
TSPAN4-206ENST00000397408 NMBP08949 121 aa15.19■□□□□ 0.02
TSPAN4-206ENST00000397408 RNASE4P34096 147 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-206ENST00000397408 PRR9Q5T870 116 aa15.19■□□□□ 0.02
TSPAN4-206ENST00000397408 SFT2D1Q8WV19 159 aa15.19■□□□□ 0.02
TSPAN4-206ENST00000397408 TRAV8-1A0A0A6YYK1 113 aa15.18■□□□□ 0.02
TSPAN4-206ENST00000397408 A0A1B0GV50 99 aa15.18■□□□□ 0.02
TSPAN4-206ENST00000397408 TCRAP04437 139 aa15.18■□□□□ 0.02
TSPAN4-206ENST00000397408 AZU1P20160 251 aa15.18■□□□□ 0.02
TSPAN4-206ENST00000397408 PHLDA1Q8WV24 401 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-206ENST00000397408 MBD3L1Q8WWY6 194 aa15.18■□□□□ 0.02
TSPAN4-206ENST00000397408 SERTM2A0A1B0GWG4 89 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 NUPR2A6NF83 97 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 SPART-AS1P0CW21 52 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 FAM222AQ5U5X8 452 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 ZNF767PQ75MW2 155 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 FAM74A7A6NL05 159 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 H2AFB1P0C5Y9 115 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 NKX2-5P52952 324 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 DKK2Q9UBU2 259 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 EPDR1Q9UM22 224 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 LENEPQ9Y5L5 61 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 TENM2Q9NT68 2774 aa15.17■□□□□ 0.02
TSPAN4-206ENST00000397408 K7EQM0 130 aa15.16■□□□□ 0.02
TSPAN4-206ENST00000397408 IFNA7P01567 189 aa15.16■□□□□ 0.02
TSPAN4-206ENST00000397408 CEMP1Q6PRD7 247 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-206ENST00000397408 Q6ZTC4 211 aa15.16■□□□□ 0.02
TSPAN4-206ENST00000397408 C16orf74Q96GX8 76 aa15.16■□□□□ 0.02
TSPAN4-206ENST00000397408 SGK494Q96LW2 274 aa15.16■□□□□ 0.02
TSPAN4-206ENST00000397408 PYGO2Q9BRQ0 406 aa15.16■□□□□ 0.02
TSPAN4-206ENST00000397408 TEX48A0A1B0GUV7 120 aa15.15■□□□□ 0.02
TSPAN4-206ENST00000397408 PLAC8L1A1L4L8 177 aa15.15■□□□□ 0.02
TSPAN4-206ENST00000397408 ZNF324O75467 553 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-206ENST00000397408 RAB5CP51148 216 aa15.15■□□□□ 0.02
TSPAN4-206ENST00000397408 C12orf74Q32Q52 190 aa15.15■□□□□ 0.02
TSPAN4-206ENST00000397408 CYB561D1Q8N8Q1 229 aa15.15■□□□□ 0.02
TSPAN4-206ENST00000397408 RNASE8Q8TDE3 154 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms