RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TRBV6-1A0A0K0K1D8 114 aa12.59□□□□□ -0.39
TSPAN4-205ENST00000397406 C9JCJ5 164 aa12.59□□□□□ -0.39
TSPAN4-205ENST00000397406 F6UB75 175 aa12.59□□□□□ -0.39
TSPAN4-205ENST00000397406 KRTAP10-11P60412 298 aa12.59□□□□□ -0.39
TSPAN4-205ENST00000397406 UBE2G1P62253 170 aa12.59□□□□□ -0.39
TSPAN4-205ENST00000397406 ODF3L2Q3SX64 289 aa12.59□□□□□ -0.39
TSPAN4-205ENST00000397406 Q86TA4 180 aa12.59□□□□□ -0.39
TSPAN4-205ENST00000397406 DEFB131AP59861 70 aa12.58□□□□□ -0.4
TSPAN4-205ENST00000397406 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
TSPAN4-205ENST00000397406 ERCC8Q13216 396 aa12.58□□□□□ -0.4
TSPAN4-205ENST00000397406 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
TSPAN4-205ENST00000397406 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
TSPAN4-205ENST00000397406 OR8A1Q8NGG7 326 aa12.58□□□□□ -0.4
TSPAN4-205ENST00000397406 PSG8Q9UQ74 426 aa12.58□□□□□ -0.4
TSPAN4-205ENST00000397406 AGRNO00468 2067 aa12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 NPIPB6E9PJ23 425 aa12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 LTAP01374 205 aa12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 ZNF705DP0CH99 300 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 ZNF705BP0CI00 300 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 GDF5OSQ5U4N7 250 aa12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 NIPSNAP3BQ9BS92 247 aa12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 AGPAT4-IT1Q9H0P7 198 aa12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 NAT8Q9UHE5 227 aa12.57□□□□□ -0.4
TSPAN4-205ENST00000397406 A0A0J9YX75 114 aa12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 PGPEP1LA6NFU8 196 aa12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 GNG4P50150 75 aa12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 TMEM241Q24JQ0 296 aa12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 PRNTQ86SH4 94 aa12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 SDF2L1Q9HCN8 221 aa12.56□□□□□ -0.4
TSPAN4-205ENST00000397406 K7EIL1 84 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 CD7P09564 240 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 ZNF124Q15973 351 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 FOXI2Q6ZQN5 318 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 Q8TAT8 98 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 TVP23CQ96ET8 276 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 ASCL2Q99929 193 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 FAM110AQ9BQ89 295 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 GPR61Q9BZJ8 451 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 LY96Q9Y6Y9 160 aa12.55□□□□□ -0.4
TSPAN4-205ENST00000397406 APOC3P02656 99 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 S100A1P23297 94 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 RPL23P62829 140 aaKnown RBP12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 HIST1H1AQ02539 215 aaPredicted RBP12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 TMEM78Q5T7P6 136 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 LINC01551Q86U37 167 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 APRG1Q8IVJ8 170 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 OCC1Q8TAD7 63 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 MRAPQ8TCY5 172 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 K7EN84 100 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 ZNF138P52744 262 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 EBLN2Q6P2I7 272 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 SMIM12Q96EX1 92 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 LINC00477Q96M19 166 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 PRR25Q96S07 402 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
TSPAN4-205ENST00000397406 KNCNA6PVL3 124 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 A8MTW9 85 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 CT45A10P0DMU9 189 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 EGFEM1PQ0D2K5 195 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 PNRC1Q12796 327 aaPredicted RBP12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 TMEM183AQ8IXX5 376 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 FAM19A4Q96LR4 140 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
TSPAN4-205ENST00000397406 DNAH9Q9NYC9 4486 aa12.52□□□□□ -0.4
TSPAN4-205ENST00000397406 DUSP14O95147 198 aaKnown RBP12.52□□□□□ -0.41
TSPAN4-205ENST00000397406 ACTL10Q5JWF8 245 aa12.52□□□□□ -0.41
TSPAN4-205ENST00000397406 C8orf49Q96NF6 230 aa12.52□□□□□ -0.41
TSPAN4-205ENST00000397406 LENEPQ9Y5L5 61 aa12.52□□□□□ -0.41
TSPAN4-205ENST00000397406 H3BMM0 161 aa12.51□□□□□ -0.41
TSPAN4-205ENST00000397406 ADIRFQ15847 76 aa12.51□□□□□ -0.41
TSPAN4-205ENST00000397406 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
TSPAN4-205ENST00000397406 COX8CQ7Z4L0 72 aa12.51□□□□□ -0.41
TSPAN4-205ENST00000397406 SVBPQ8N300 66 aa12.51□□□□□ -0.41
TSPAN4-205ENST00000397406 GCGP01275 180 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 AMTNQ6UX39 209 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 CLRN3Q8NCR9 226 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 OR4B1Q8NGF8 309 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 ISOC2Q96AB3 205 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 ODF3Q96PU9 254 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 NDFIP1Q9BT67 221 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
TSPAN4-205ENST00000397406 TRBV7-9A0A0J9YWB2 115 aa12.49□□□□□ -0.41
TSPAN4-205ENST00000397406 MGST1P10620 155 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-205ENST00000397406 OR5I1Q13606 314 aa12.49□□□□□ -0.41
TSPAN4-205ENST00000397406 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-205ENST00000397406 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms