RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ICAM4Q14773 271 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 GUK1Q16774 197 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 PYDC2Q56P42 97 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 Q6ZRN7 208 aaPredicted RBP6□□□□□ -1.45
CAPN3-208ENST00000397204 Q6ZTI0 123 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 ZNF546Q86UE3 836 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 ZBTB8BQ8NAP8 495 aaPredicted RBP6□□□□□ -1.45
CAPN3-208ENST00000397204 ZNF431Q8TF32 576 aaPredicted RBP6□□□□□ -1.45
CAPN3-208ENST00000397204 TRIM63Q969Q1 353 aa6□□□□□ -1.45
CAPN3-208ENST00000397204 FLG2Q5D862 2391 aaPredicted RBP6□□□□□ -1.45
CAPN3-208ENST00000397204 TRGV2A0A075B6R0 118 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 TRAV9-2A0A087WT02 112 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 AGPAT2O15120 278 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 SSSCA1O60232 199 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 COX7A2P2O60397 106 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 SLC25A5P05141 298 aaKnown RBP5.99□□□□□ -1.45
CAPN3-208ENST00000397204 SNRPCP09234 159 aaKnown RBP5.99□□□□□ -1.45
CAPN3-208ENST00000397204 METTL15P1P0C7V9 234 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 IGLC2P0DOY2 106 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 PRB4P10163 310 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-208ENST00000397204 ERVFC1-1P60608 527 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 SLC38A11Q08AI6 406 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 SLAQ13239 276 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 NFE4Q86UQ8 179 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 ZNF680Q8NEM1 530 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 TMEM37Q8WXS4 190 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 LINC00467Q9BRT7 94 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 PARD6GQ9BYG4 376 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-208ENST00000397204 TMPRSS5Q9H3S3 457 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 DNAJC4Q9NNZ3 241 aa5.99□□□□□ -1.45
CAPN3-208ENST00000397204 H3BQ15 152 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 K7EP13 123 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 SLC17A3O00476 420 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 ZNF253O75346 499 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 ZNF324O75467 553 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-208ENST00000397204 CCNKO75909 580 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 IFNA5P01569 189 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 RAB31Q13636 194 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 OPCMLQ14982 345 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 MAJINQ3KP22 176 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 ANXA2RQ3ZCQ2 193 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 C10orf113Q5VZT2 155 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 Q6ZRG5 221 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 FRZBQ92765 325 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 GSN-AS1Q9NRJ2 163 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 FUT9Q9Y231 359 aa5.98□□□□□ -1.45
CAPN3-208ENST00000397204 TRGV1A0A0A0MS02 117 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 C7orf71A4D174 169 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 H3BMQ9 156 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 H3BTX0 84 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 NOL3O60936 208 aaKnown RBP5.97□□□□□ -1.45
CAPN3-208ENST00000397204 NDUFB6O95139 128 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 NXPH4O95158 308 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 NMBP08949 121 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 ARL16Q0P5N6 197 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 LYPD5Q6UWN5 251 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 C12orf45Q8N5I9 185 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-208ENST00000397204 EIF4E3Q8N5X7 224 aaKnown RBP5.97□□□□□ -1.45
CAPN3-208ENST00000397204 C11orf72Q8NBR9 251 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 MRPL53Q96EL3 112 aaKnown RBP5.97□□□□□ -1.45
CAPN3-208ENST00000397204 LINC00477Q96M19 166 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 PRO0255Q9UI72 69 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 ICOSQ9Y6W8 199 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 V9GYH0 126 aa5.97□□□□□ -1.45
CAPN3-208ENST00000397204 C7orf66A4D0T2 115 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 NAP1L6A6NFF2 107 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 KLLNB2CW77 178 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 SPINK4O60575 86 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 MPDU1O75352 247 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 OR4E1P0C645 316 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 CAMLGP49069 296 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 TCL1AP56279 114 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 MRPL23Q16540 153 aaKnown RBP5.96□□□□□ -1.46
CAPN3-208ENST00000397204 RNF151Q2KHN1 245 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 IAH1Q2TAA2 248 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-208ENST00000397204 Q5VSD8 79 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 MORN5Q5VZ52 161 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 OR1L4Q8NGR5 311 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 ST6GAL2Q96JF0 529 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 PFDN5Q99471 154 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 MGST2Q99735 147 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 GSKIPQ9P0R6 139 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 HHLA3Q9XRX5 114 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 TNFRSF18Q9Y5U5 241 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.46
CAPN3-208ENST00000397204 A0A087WTM6 91 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 TRAV5A0A0B4J249 113 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 ATP6V1G1O75348 118 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 GPX1P07203 203 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 CRISP2P16562 243 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 RNASE4P34096 147 aaKnown RBP5.95□□□□□ -1.46
CAPN3-208ENST00000397204 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 ODF1Q14990 250 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 CNPY1Q3B7I2 92 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 IBA57Q5T440 356 aaKnown RBP5.95□□□□□ -1.46
CAPN3-208ENST00000397204 NEGR1Q7Z3B1 354 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 NRARPQ7Z6K4 114 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 FAM19A4Q96LR4 140 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 MRPL32Q9BYC8 188 aaKnown RBP5.95□□□□□ -1.46
CAPN3-208ENST00000397204 AGPAT4-IT1Q9H0P7 198 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms