RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 IBA57Q5T440 356 aaKnown RBP13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 UBE2E2Q96LR5 201 aa13.24□□□□□ -0.29
TNFSF13-205ENST00000396545 ZNF320A2RRD8 509 aa13.23□□□□□ -0.29
TNFSF13-205ENST00000396545 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
TNFSF13-205ENST00000396545 PEF1Q9UBV8 284 aaKnown RBP13.23□□□□□ -0.29
TNFSF13-205ENST00000396545 RPH3ALQ9UNE2 315 aa13.23□□□□□ -0.29
TNFSF13-205ENST00000396545 ZNF253O75346 499 aa13.22□□□□□ -0.29
TNFSF13-205ENST00000396545 IGLV2-11P01706 119 aa13.22□□□□□ -0.29
TNFSF13-205ENST00000396545 HOXA5P20719 270 aa13.22□□□□□ -0.29
TNFSF13-205ENST00000396545 NHLRC2Q8NBF2 726 aa13.22□□□□□ -0.29
TNFSF13-205ENST00000396545 METTL26Q96S19 204 aa13.22□□□□□ -0.29
TNFSF13-205ENST00000396545 C1orf194Q5T5A4 169 aa13.21□□□□□ -0.29
TNFSF13-205ENST00000396545 Q86TA4 180 aa13.21□□□□□ -0.29
TNFSF13-205ENST00000396545 ARL6IP6Q8N6S5 226 aa13.21□□□□□ -0.29
TNFSF13-205ENST00000396545 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
TNFSF13-205ENST00000396545 SMIM27A0A1W2PRY6 76 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 NDUFA6P56556 154 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 ZNF492Q9P255 531 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 ZNF256Q9Y2P7 627 aaPredicted RBP13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 SMAD5-AS1Q9Y6J3 95 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 A0A087X0K7 114 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 BUB3O43684 328 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 IGHV3-11P01762 117 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 LGALS1P09382 135 aaKnown RBP13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 PSG9Q00887 426 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 GOLT1AQ6ZVE7 132 aa13.2□□□□□ -0.3
TNFSF13-205ENST00000396545 SORL1Q92673 2214 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 IGHV3-35A0A0C4DH35 117 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 ZNF705GA8MUZ8 300 aaPredicted RBP13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 FAM106AQ4KMX7 169 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 GPHB5Q86YW7 130 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 TMEM183AQ8IXX5 376 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 OR8I2Q8N0Y5 310 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 NUDT10Q8NFP7 164 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 NUDT11Q96G61 164 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 SGK494Q96LW2 274 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 AAMDCQ9H7C9 122 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 U3KQE9 123 aa13.19□□□□□ -0.3
TNFSF13-205ENST00000396545 SERTM2A0A1B0GWG4 89 aa13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 C19orf71A6NCJ1 209 aa13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 DIRC3C9JPN6 131 aa13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 GATCO43716 136 aaKnown RBP13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 INSL3P51460 131 aa13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 AKR1D1P51857 326 aa13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 OR1N2Q8NGR9 330 aa13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 GRAMD2BQ96HH9 432 aa13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 DNAH7Q8WXX0 4024 aa13.18□□□□□ -0.3
TNFSF13-205ENST00000396545 K7EMT4 169 aa13.17□□□□□ -0.3
TNFSF13-205ENST00000396545 LINC00518Q8N0U6 118 aa13.17□□□□□ -0.3
TNFSF13-205ENST00000396545 ASCL2Q99929 193 aa13.17□□□□□ -0.3
TNFSF13-205ENST00000396545 TRAPPC1Q9Y5R8 145 aa13.17□□□□□ -0.3
TNFSF13-205ENST00000396545 HUWE1Q7Z6Z7 4374 aaKnown RBP13.17□□□□□ -0.3
TNFSF13-205ENST00000396545 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 TRAV8-1A0A0A6YYK1 113 aa13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 A0A1W2PS18 150 aa13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 K7EQM0 130 aa13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 MEOX2P50222 304 aa13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 PSG3Q16557 428 aa13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 COA6Q5JTJ3 125 aaKnown RBP13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 ZFP30Q9Y2G7 519 aa13.16□□□□□ -0.3
TNFSF13-205ENST00000396545 M0R3E3 92 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 S100A8P05109 93 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 RPL19P84098 196 aaKnown RBP13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 CT83Q5H943 113 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 IZUMO1RA6ND01 250 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 NPIPB6E9PJ23 425 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 BMI1P35226 326 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 COX19Q49B96 90 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 PRNTQ86SH4 94 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 TSKUQ8WUA8 353 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 UFC1Q9Y3C8 167 aa13.15□□□□□ -0.3
TNFSF13-205ENST00000396545 IFITM10A6NMD0 228 aa13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 C3orf84H3BNL1 204 aa13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 CSN1S1P47710 185 aa13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 HIST3H2BBQ8N257 126 aa13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 RPP21Q9H633 154 aaKnown RBP13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 DAZ1Q9NQZ3 744 aaKnown RBP13.14□□□□□ -0.31
TNFSF13-205ENST00000396545 FBLL1A6NHQ2 334 aaKnown RBP13.13□□□□□ -0.31
TNFSF13-205ENST00000396545 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
TNFSF13-205ENST00000396545 LGALS9O00182 355 aa13.13□□□□□ -0.31
TNFSF13-205ENST00000396545 OVOL1O14753 267 aa13.13□□□□□ -0.31
TNFSF13-205ENST00000396545 APOHP02749 345 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13-205ENST00000396545 TCL1AP56279 114 aa13.13□□□□□ -0.31
TNFSF13-205ENST00000396545 GNB1LQ9BYB4 327 aa13.13□□□□□ -0.31
TNFSF13-205ENST00000396545 CBLN1P23435 193 aa13.12□□□□□ -0.31
TNFSF13-205ENST00000396545 RASL11AQ6T310 242 aa13.12□□□□□ -0.31
TNFSF13-205ENST00000396545 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
TNFSF13-205ENST00000396545 SLC50A1Q9BRV3 221 aa13.12□□□□□ -0.31
TNFSF13-205ENST00000396545 MT-ND6P03923 174 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 FRMD6-AS1P0C7T7 363 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 GFI1BQ5VTD9 330 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms