RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 GAS8-AS1O95177 125 aa12.17□□□□□ -0.46
HOXA3-202ENST00000396352 NBL1P41271 181 aa12.17□□□□□ -0.46
HOXA3-202ENST00000396352 PEF1Q9UBV8 284 aaKnown RBP12.17□□□□□ -0.46
HOXA3-202ENST00000396352 LINC01546A6NGU7 62 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 NDUFS7O75251 213 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 TMEM11P17152 192 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 TCTAP57738 103 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 PRSS57Q6UWY2 283 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 C1orf122Q6ZSJ8 110 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 MSRB2Q9Y3D2 182 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 ERCC8Q13216 396 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 CST9LQ9H4G1 147 aa12.16□□□□□ -0.46
HOXA3-202ENST00000396352 PRAC2D3DTV9 90 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 SMAD7O15105 426 aaKnown RBP12.15□□□□□ -0.46
HOXA3-202ENST00000396352 Q8N9W7 124 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 PTPRQQ9UMZ3 2332 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 CCL21O00585 134 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 ORM1P02763 201 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 ZFP36P26651 326 aaKnown RBP12.15□□□□□ -0.46
HOXA3-202ENST00000396352 ZFAND3Q9H8U3 227 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 SCGB2A1O75556 95 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 MINOS1Q5TGZ0 78 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 MINOS1-NBL1R4GNA1 71 aa12.15□□□□□ -0.46
HOXA3-202ENST00000396352 FOXC1Q12948 553 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 ZNF502Q8TBZ5 544 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 DKK2Q9UBU2 259 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 FABP5P3A8MUU1 101 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 UQCRFS1P47985 274 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 ADORA2A-AS1P86434 159 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 LINC01559Q495D7 138 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 ADAMTSL5Q6ZMM2 481 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 WFDC3Q8IUB2 231 aa12.14□□□□□ -0.47
HOXA3-202ENST00000396352 C15orf32Q32M92 178 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 RNF182Q8N6D2 247 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 BUB3O43684 328 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 OR9G4Q8NGQ1 327 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 MAP1LC3AQ9H492 121 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 MUC6Q6W4X9 2439 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 OCIAD2Q56VL3 154 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 IL17RELQ6ZVW7 336 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 PCP2Q8IVA1 136 aa12.13□□□□□ -0.47
HOXA3-202ENST00000396352 FAM110DQ8TAY7 271 aaPredicted RBP12.13□□□□□ -0.47
HOXA3-202ENST00000396352 SIVA1O15304 175 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 PPBPP02775 128 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 SIRPDQ9H106 197 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 A1L4Q6 167 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 CLPSL1A2RUU4 121 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 KLK9Q2XQG4 91 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 KLK9Q9UKQ9 250 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 RBAKDNA6NC62 111 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 HSD52Q0P140 79 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 RNF151Q2KHN1 245 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 JMJD8Q96S16 334 aa12.12□□□□□ -0.47
HOXA3-202ENST00000396352 GAGE12BA1L429 117 aa12.11□□□□□ -0.47
HOXA3-202ENST00000396352 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
HOXA3-202ENST00000396352 H3BRM9 83 aa12.11□□□□□ -0.47
HOXA3-202ENST00000396352 PPIFP30405 207 aaKnown RBP12.11□□□□□ -0.47
HOXA3-202ENST00000396352 C9orf118A6NHY6 69 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 CLEC3BP05452 202 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 EVI2AP22794 236 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 S100A7P31151 101 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 NMUP48645 174 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 ECSCRQ19T08 205 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 UFSP1Q6NVU6 142 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 C11orf21Q9P2W6 132 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 A6NDN8 102 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 ATP6V0E1O15342 81 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 GATA1P15976 413 aaPredicted RBP12.1□□□□□ -0.47
HOXA3-202ENST00000396352 FCER1GP30273 86 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 LEPP41159 167 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 CCDC140Q96MF4 163 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 IGHV3-66A0A0C4DH42 116 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 ODF1Q14990 250 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 OR4X2Q8NGF9 303 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 PIFOQ8TCI5 191 aa12.1□□□□□ -0.47
HOXA3-202ENST00000396352 ZFHX3Q15911 3703 aa12.09□□□□□ -0.47
HOXA3-202ENST00000396352 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
HOXA3-202ENST00000396352 NXT2Q9NPJ8 142 aaKnown RBP12.09□□□□□ -0.47
HOXA3-202ENST00000396352 WNK2Q9Y3S1 2297 aa12.09□□□□□ -0.47
HOXA3-202ENST00000396352 RAB9AP51151 201 aa12.09□□□□□ -0.47
HOXA3-202ENST00000396352 DTX2Q86UW9 622 aa12.09□□□□□ -0.47
HOXA3-202ENST00000396352 HHLA3Q9XRX5 114 aa12.09□□□□□ -0.47
HOXA3-202ENST00000396352 SLC50A1Q9BRV3 221 aa12.08□□□□□ -0.47
HOXA3-202ENST00000396352 AGPAT4-IT1Q9H0P7 198 aa12.08□□□□□ -0.47
HOXA3-202ENST00000396352 IGLV2-18A0A075B6J9 118 aa12.08□□□□□ -0.48
HOXA3-202ENST00000396352 TRAV8-2A0A0B4J237 113 aa12.08□□□□□ -0.48
HOXA3-202ENST00000396352 IGKV2D-26A0A0A0MRZ7 120 aa12.08□□□□□ -0.48
HOXA3-202ENST00000396352 GAGE10A6NGK3 116 aa12.07□□□□□ -0.48
HOXA3-202ENST00000396352 TRGV3P03979 118 aa12.07□□□□□ -0.48
HOXA3-202ENST00000396352 LINC01548A6NM66 108 aa12.07□□□□□ -0.48
HOXA3-202ENST00000396352 CLEC19AQ6UXS0 136 aa12.07□□□□□ -0.48
HOXA3-202ENST00000396352 IGHV3OR16-13A0A075B7E8 117 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 IGHV3-74A0A0B4J1X5 117 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 A0A1W2PPR1 153 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms