RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 OR4C46A6NHA9 309 aa15.28■□□□□ 0.04
VCPKMT-202ENST00000395860 IGLV1-51P01701 117 aa15.28■□□□□ 0.04
VCPKMT-202ENST00000395860 TMEM78Q5T7P6 136 aa15.28■□□□□ 0.04
VCPKMT-202ENST00000395860 ASCL2Q99929 193 aa15.28■□□□□ 0.04
VCPKMT-202ENST00000395860 ZNF705DP0CH99 300 aaPredicted RBP15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 ZNF705BP0CI00 300 aaPredicted RBP15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 DEFB1P60022 68 aa15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 OR5I1Q13606 314 aa15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 C9orf47Q6ZRZ4 202 aa15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 TMEM183AQ8IXX5 376 aa15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 OR2K2Q8NGT1 345 aa15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 Q8TAT8 98 aa15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 AGPAT4-IT1Q9H0P7 198 aa15.27■□□□□ 0.04
VCPKMT-202ENST00000395860 F6UB75 175 aa15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 GCGP01275 180 aa15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 HIST1H1AQ02539 215 aaPredicted RBP15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 OR8A1Q8NGG7 326 aa15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 MLST8Q9BVC4 326 aa15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 FBN1P35555 2871 aaKnown RBP15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 CD33P20138 364 aa15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 RNF212Q495C1 297 aa15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 SAPCD1Q5SSQ6 148 aa15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 NDFIP1Q9BT67 221 aa15.26■□□□□ 0.03
VCPKMT-202ENST00000395860 MT-ND4LP03901 98 aa15.25■□□□□ 0.03
VCPKMT-202ENST00000395860 SFRP2Q96HF1 295 aa15.25■□□□□ 0.03
VCPKMT-202ENST00000395860 PRR25Q96S07 402 aa15.25■□□□□ 0.03
VCPKMT-202ENST00000395860 ZNF256Q9Y2P7 627 aaPredicted RBP15.25■□□□□ 0.03
VCPKMT-202ENST00000395860 ZNF138P52744 262 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 PRR27Q6MZM9 219 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 SPATA3Q8NHX4 192 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 LINC00477Q96M19 166 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 C8orf49Q96NF6 230 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 BIN3Q9NQY0 253 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 ZNF492Q9P255 531 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 A0A087WWC5 75 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 NPIPB6E9PJ23 425 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 DEFB131AP59861 70 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 ERVFC1-1P60608 527 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 C9orf66Q5T8R8 295 aa15.24■□□□□ 0.03
VCPKMT-202ENST00000395860 INSL3P51460 131 aa15.23■□□□□ 0.03
VCPKMT-202ENST00000395860 EBLN2Q6P2I7 272 aa15.23■□□□□ 0.03
VCPKMT-202ENST00000395860 ANAPC16Q96DE5 110 aa15.23■□□□□ 0.03
VCPKMT-202ENST00000395860 GPR61Q9BZJ8 451 aa15.23■□□□□ 0.03
VCPKMT-202ENST00000395860 GDF5OSQ5U4N7 250 aa15.22■□□□□ 0.03
VCPKMT-202ENST00000395860 ZC2HC1AQ96GY0 325 aa15.22■□□□□ 0.03
VCPKMT-202ENST00000395860 CTDSP1Q9GZU7 261 aa15.22■□□□□ 0.03
VCPKMT-202ENST00000395860 MAP6D1Q9H9H5 199 aa15.22■□□□□ 0.03
VCPKMT-202ENST00000395860 PPP1R14DQ9NXH3 145 aa15.22■□□□□ 0.03
VCPKMT-202ENST00000395860 IBA57Q5T440 356 aaKnown RBP15.21■□□□□ 0.03
VCPKMT-202ENST00000395860 C15orf54Q8N8G6 183 aa15.21■□□□□ 0.03
VCPKMT-202ENST00000395860 OR10G8Q8NGN5 311 aa15.21■□□□□ 0.03
VCPKMT-202ENST00000395860 MCRIP2Q9BUT9 160 aaKnown RBP15.21■□□□□ 0.03
VCPKMT-202ENST00000395860 RNASE7Q9H1E1 156 aaKnown RBP15.21■□□□□ 0.03
VCPKMT-202ENST00000395860 SAV1Q9H4B6 383 aaPredicted RBP15.21■□□□□ 0.03
VCPKMT-202ENST00000395860 A0A0J9YX75 114 aa15.21■□□□□ 0.02
VCPKMT-202ENST00000395860 PPP1R2P9O14990 202 aa15.21■□□□□ 0.02
VCPKMT-202ENST00000395860 CT45A10P0DMU9 189 aa15.21■□□□□ 0.02
VCPKMT-202ENST00000395860 TMEM88Q6PEY1 159 aa15.21■□□□□ 0.02
VCPKMT-202ENST00000395860 FOXI2Q6ZQN5 318 aa15.21■□□□□ 0.02
VCPKMT-202ENST00000395860 H7BYZ3 331 aa15.2■□□□□ 0.02
VCPKMT-202ENST00000395860 BTN1A1Q13410 526 aa15.2■□□□□ 0.02
VCPKMT-202ENST00000395860 WFDC9Q8NEX5 89 aa15.2■□□□□ 0.02
VCPKMT-202ENST00000395860 OSTCQ9NRP0 149 aa15.2■□□□□ 0.02
VCPKMT-202ENST00000395860 TMEM242Q9NWH2 141 aa15.2■□□□□ 0.02
VCPKMT-202ENST00000395860 LENEPQ9Y5L5 61 aa15.2■□□□□ 0.02
VCPKMT-202ENST00000395860 SMUG1Q53HV7 270 aa15.19■□□□□ 0.02
VCPKMT-202ENST00000395860 CBLN2Q8IUK8 224 aa15.19■□□□□ 0.02
VCPKMT-202ENST00000395860 DAZAP1Q96EP5 407 aaKnown RBP15.19■□□□□ 0.02
VCPKMT-202ENST00000395860 DUSP14O95147 198 aaKnown RBP15.19■□□□□ 0.02
VCPKMT-202ENST00000395860 LINC00322Q6ZN03 302 aaPredicted RBP15.19■□□□□ 0.02
VCPKMT-202ENST00000395860 FAM231DQ6ZW35 169 aa15.19■□□□□ 0.02
VCPKMT-202ENST00000395860 COX8CQ7Z4L0 72 aa15.19■□□□□ 0.02
VCPKMT-202ENST00000395860 SMCO4Q9NRQ5 59 aa15.19■□□□□ 0.02
VCPKMT-202ENST00000395860 CMC4P56277 68 aaPredicted RBP15.18■□□□□ 0.02
VCPKMT-202ENST00000395860 ODF3L2Q3SX64 289 aa15.18■□□□□ 0.02
VCPKMT-202ENST00000395860 NUDT10Q8NFP7 164 aa15.18■□□□□ 0.02
VCPKMT-202ENST00000395860 OR4B1Q8NGF8 309 aa15.18■□□□□ 0.02
VCPKMT-202ENST00000395860 NUDT11Q96G61 164 aa15.18■□□□□ 0.02
VCPKMT-202ENST00000395860 SORL1Q92673 2214 aa15.18■□□□□ 0.02
VCPKMT-202ENST00000395860 KNCNA6PVL3 124 aa15.17■□□□□ 0.02
VCPKMT-202ENST00000395860 OR11H12B2RN74 326 aa15.17■□□□□ 0.02
VCPKMT-202ENST00000395860 ACTL10Q5JWF8 245 aa15.17■□□□□ 0.02
VCPKMT-202ENST00000395860 APRG1Q8IVJ8 170 aa15.17■□□□□ 0.02
VCPKMT-202ENST00000395860 C19orf71A6NCJ1 209 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 ZNF705GA8MUZ8 300 aaPredicted RBP15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 ZNF124Q15973 351 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 BEAN1Q3B7T3 259 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 GATCO43716 136 aaKnown RBP15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 IGKV3-20P01619 116 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 P01737 135 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 CRIP1P50238 77 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 FAM162BQ5T6X4 162 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 FAM19A4Q96LR4 140 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 V9GYV3 84 aa15.16■□□□□ 0.02
VCPKMT-202ENST00000395860 AGRNO00468 2067 aa15.15■□□□□ 0.02
VCPKMT-202ENST00000395860 TRBV7-9A0A0J9YWB2 115 aa15.15■□□□□ 0.02
VCPKMT-202ENST00000395860 HLA-DRB4P13762 266 aa15.15■□□□□ 0.02
VCPKMT-202ENST00000395860 IGLL1P15814 213 aa15.15■□□□□ 0.02
VCPKMT-202ENST00000395860 ZNF80P51504 273 aaPredicted RBP15.15■□□□□ 0.02
VCPKMT-202ENST00000395860 HLA-DRB4X5D2U9 266 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms