RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 EREGO14944 169 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 CXCL2P19875 107 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 M6PRP20645 277 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 GCSAMLQ5JQS6 135 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 CDPF1Q6NVV7 123 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 BAP18Q8IXM2 172 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 LYPD1Q8N2G4 141 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 ZNF738Q8NE65 137 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 FRZBQ92765 325 aa13.66□□□□□ -0.22
UPK3B-203ENST00000394849 OR2T35Q8NGX2 323 aa13.65□□□□□ -0.22
UPK3B-203ENST00000394849 SLC50A1Q9BRV3 221 aa13.65□□□□□ -0.22
UPK3B-203ENST00000394849 MRPS16Q9Y3D3 137 aaKnown RBP13.65□□□□□ -0.22
UPK3B-203ENST00000394849 FXYD6-FXYD2A0A087WZ82 144 aa13.64□□□□□ -0.23
UPK3B-203ENST00000394849 H3BTX0 84 aa13.64□□□□□ -0.23
UPK3B-203ENST00000394849 OR5I1Q13606 314 aa13.64□□□□□ -0.23
UPK3B-203ENST00000394849 Q5BKY6 102 aa13.64□□□□□ -0.23
UPK3B-203ENST00000394849 FFAR4Q5NUL3 377 aa13.64□□□□□ -0.23
UPK3B-203ENST00000394849 INO80EQ8NBZ0 244 aaPredicted RBP13.64□□□□□ -0.23
UPK3B-203ENST00000394849 AQP10Q96PS8 301 aa13.64□□□□□ -0.23
UPK3B-203ENST00000394849 WFDC1Q9HC57 220 aa13.64□□□□□ -0.23
UPK3B-203ENST00000394849 PPP1R14DQ9NXH3 145 aa13.64□□□□□ -0.23
UPK3B-203ENST00000394849 TRAV12-2A0A075B6T6 113 aa13.63□□□□□ -0.23
UPK3B-203ENST00000394849 TRAV26-1A0A087WT03 109 aa13.63□□□□□ -0.23
UPK3B-203ENST00000394849 IGLC2P0DOY2 106 aa13.63□□□□□ -0.23
UPK3B-203ENST00000394849 PSG3Q16557 428 aa13.63□□□□□ -0.23
UPK3B-203ENST00000394849 TMEM263Q8WUH6 116 aaKnown RBP13.63□□□□□ -0.23
UPK3B-203ENST00000394849 PARD6GQ9BYG4 376 aaPredicted RBP13.63□□□□□ -0.23
UPK3B-203ENST00000394849 ZNF331Q9NQX6 463 aaPredicted RBP13.63□□□□□ -0.23
UPK3B-203ENST00000394849 H3BQ15 152 aa13.62□□□□□ -0.23
UPK3B-203ENST00000394849 ZNF266Q14584 549 aa13.62□□□□□ -0.23
UPK3B-203ENST00000394849 GUK1Q16774 197 aa13.62□□□□□ -0.23
UPK3B-203ENST00000394849 ESRGQ1W209 222 aa13.62□□□□□ -0.23
UPK3B-203ENST00000394849 Q5VSD8 79 aa13.62□□□□□ -0.23
UPK3B-203ENST00000394849 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
UPK3B-203ENST00000394849 NOP10Q9NPE3 64 aaKnown RBP13.62□□□□□ -0.23
UPK3B-203ENST00000394849 HTN1P15515 57 aa13.61□□□□□ -0.23
UPK3B-203ENST00000394849 RHOBP62745 196 aa13.61□□□□□ -0.23
UPK3B-203ENST00000394849 MIR17HGQ75NE6 70 aa13.61□□□□□ -0.23
UPK3B-203ENST00000394849 RNASE8Q8TDE3 154 aaKnown RBP13.61□□□□□ -0.23
UPK3B-203ENST00000394849 C20orf144Q9BQM9 153 aa13.61□□□□□ -0.23
UPK3B-203ENST00000394849 ZNF586Q9NXT0 402 aa13.61□□□□□ -0.23
UPK3B-203ENST00000394849 TMEM14CQ9P0S9 112 aa13.61□□□□□ -0.23
UPK3B-203ENST00000394849 H7BYZ3 331 aa13.6□□□□□ -0.23
UPK3B-203ENST00000394849 SLC17A3O00476 420 aa13.6□□□□□ -0.23
UPK3B-203ENST00000394849 PYYP10082 97 aa13.6□□□□□ -0.23
UPK3B-203ENST00000394849 HIST1H1EP10412 219 aaKnown RBP13.6□□□□□ -0.23
UPK3B-203ENST00000394849 HIST1H1AQ02539 215 aaPredicted RBP13.6□□□□□ -0.23
UPK3B-203ENST00000394849 LINC00612Q8N6U2 182 aa13.6□□□□□ -0.23
UPK3B-203ENST00000394849 RPUSD4Q96CM3 377 aaKnown RBP13.6□□□□□ -0.23
UPK3B-203ENST00000394849 SLC25A2Q9BXI2 301 aa13.6□□□□□ -0.23
UPK3B-203ENST00000394849 FUT9Q9Y231 359 aa13.6□□□□□ -0.23
UPK3B-203ENST00000394849 SRRM2Q9UQ35 2752 aaKnown RBP13.6□□□□□ -0.23
UPK3B-203ENST00000394849 CDKN1BP46527 198 aa13.59□□□□□ -0.23
UPK3B-203ENST00000394849 XGP55808 180 aa13.59□□□□□ -0.23
UPK3B-203ENST00000394849 LINC00315P59091 139 aa13.59□□□□□ -0.23
UPK3B-203ENST00000394849 ERVFC1-1P60608 527 aa13.59□□□□□ -0.23
UPK3B-203ENST00000394849 OR8A1Q8NGG7 326 aa13.59□□□□□ -0.23
UPK3B-203ENST00000394849 SAT2Q96F10 170 aaPredicted RBP13.59□□□□□ -0.23
UPK3B-203ENST00000394849 TNFSF18Q9UNG2 199 aa13.59□□□□□ -0.23
UPK3B-203ENST00000394849 TIMM9Q9Y5J7 89 aa13.59□□□□□ -0.23
UPK3B-203ENST00000394849 ZNF253O75346 499 aa13.58□□□□□ -0.24
UPK3B-203ENST00000394849 ACOT6Q3I5F7 207 aaPredicted RBP13.58□□□□□ -0.24
UPK3B-203ENST00000394849 Q6ZRN7 208 aaPredicted RBP13.58□□□□□ -0.24
UPK3B-203ENST00000394849 CCDC28AQ8IWP9 274 aa13.58□□□□□ -0.24
UPK3B-203ENST00000394849 HSD17B11Q8NBQ5 300 aa13.58□□□□□ -0.24
UPK3B-203ENST00000394849 BLNKQ8WV28 456 aa13.58□□□□□ -0.24
UPK3B-203ENST00000394849 OR51M1Q9H341 326 aa13.58□□□□□ -0.24
UPK3B-203ENST00000394849 TRBV19A0A075B6N1 114 aa13.57□□□□□ -0.24
UPK3B-203ENST00000394849 A0A0J9YY99 117 aa13.57□□□□□ -0.24
UPK3B-203ENST00000394849 RNF222A6NCQ9 220 aa13.57□□□□□ -0.24
UPK3B-203ENST00000394849 OR7C2O60412 319 aa13.57□□□□□ -0.24
UPK3B-203ENST00000394849 PRB4P10163 310 aaPredicted RBP13.57□□□□□ -0.24
UPK3B-203ENST00000394849 FAM167A-AS1Q96KT0 104 aa13.57□□□□□ -0.24
UPK3B-203ENST00000394849 PAXXQ9BUH6 204 aa13.57□□□□□ -0.24
UPK3B-203ENST00000394849 ARPC5O15511 151 aa13.56□□□□□ -0.24
UPK3B-203ENST00000394849 TAS2R45P59539 299 aa13.56□□□□□ -0.24
UPK3B-203ENST00000394849 PDE6HQ13956 83 aa13.56□□□□□ -0.24
UPK3B-203ENST00000394849 AAMDCQ9H7C9 122 aa13.56□□□□□ -0.24
UPK3B-203ENST00000394849 FLG2Q5D862 2391 aaPredicted RBP13.56□□□□□ -0.24
UPK3B-203ENST00000394849 MYCBP2O75592 4640 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 BORCS7-ASMTA0A0B4J1R7 106 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 A0A1W2PPV4 95 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 G3V3Q6 166 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 SMLR1H3BR10 107 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 OR10J4P0C629 311 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 NBEAP1P0C6P0 100 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 HOXA5P20719 270 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 KHDC3LQ587J8 217 aa13.55□□□□□ -0.24
UPK3B-203ENST00000394849 SNURFLB1AK76 121 aa13.54□□□□□ -0.24
UPK3B-203ENST00000394849 SIVA1O15304 175 aa13.54□□□□□ -0.24
UPK3B-203ENST00000394849 ATP6V0CP27449 155 aa13.54□□□□□ -0.24
UPK3B-203ENST00000394849 RAB2AP61019 212 aa13.54□□□□□ -0.24
UPK3B-203ENST00000394849 FAM122CQ6P4D5 195 aa13.54□□□□□ -0.24
UPK3B-203ENST00000394849 NFE4Q86UQ8 179 aa13.54□□□□□ -0.24
UPK3B-203ENST00000394849 PSMG3Q9BT73 122 aaPredicted RBP13.54□□□□□ -0.24
UPK3B-203ENST00000394849 PRELID1Q9Y255 219 aa13.54□□□□□ -0.24
UPK3B-203ENST00000394849 GAGE12BA1L429 117 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 GAGE7O76087 117 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 NDUFB4O95168 129 aa13.53□□□□□ -0.24
UPK3B-203ENST00000394849 GAGE12FP0CL80 117 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms