RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 ZNF48Q96MX3 618 aaPredicted RBP8.59□□□□□ -1.03
TCOF1-203ENST00000394269 ZFAND3Q9H8U3 227 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 ZFP30Q9Y2G7 519 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 ARMS2P0C7Q2 107 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 PLA2G2AP14555 144 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 LINC00310P59036 64 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 OR4X2Q8NGF9 303 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 C16orf92Q96LL3 132 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 COL6A5A8TX70 2615 aa8.59□□□□□ -1.03
TCOF1-203ENST00000394269 SLC25A16P16260 332 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 DEFA6Q01524 100 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 HIST2H2BDQ6DRA6 164 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 PRSS22Q9GZN4 317 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 TMEM238LA0A1B0GVL6 79 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 CLPSL1A2RUU4 121 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 TMEM189A5PLL7 270 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 A6NDX4 124 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 DDTP30046 118 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 PDE6HQ13956 83 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 CYB5R2Q6BCY4 276 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 Q96MF0 132 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 MGAM2Q2M2H8 2515 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 HSBP1O75506 76 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 DSCR9P59020 149 aa8.58□□□□□ -1.04
TCOF1-203ENST00000394269 TFPI2P48307 235 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 TM4SF20Q53R12 229 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 Q6ZWC4 215 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 GLMPQ8WWB7 406 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 CLEC5AQ9NY25 188 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 H0Y8G0 127 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 SH2D1AO60880 128 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 WFDC12Q8WWY7 111 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 PRR25Q96S07 402 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 A0A1W2PS18 150 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 TSTD3H0UI37 97 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 IGHG2P01859 326 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 ZNF80P51504 273 aaPredicted RBP8.57□□□□□ -1.04
TCOF1-203ENST00000394269 C18orf32Q8TCD1 76 aa8.57□□□□□ -1.04
TCOF1-203ENST00000394269 S100A7P31151 101 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 RAB9AP51151 201 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 COX19Q49B96 90 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 BORCS7Q96B45 105 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 SMR3AQ99954 134 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 ZNF492Q9P255 531 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
TCOF1-203ENST00000394269 A0A1B0GUT8 65 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 IGHG4P01861 327 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 EDN2P20800 178 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 TDRG1Q3Y452 100 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 FAM162BQ5T6X4 162 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 LYZL1Q6UWQ5 148 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 NDFIP1Q9BT67 221 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 NAGKQ9UJ70 344 aa8.56□□□□□ -1.04
TCOF1-203ENST00000394269 TMEM213A2RRL7 107 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 REC114Q7Z4M0 266 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 ATOH7Q8N100 152 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 ZNF738Q8NE65 137 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 SMIM12Q96EX1 92 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 NRN1Q9NPD7 142 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 FAM223BA6NKX1 122 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 A8MWP6 167 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 GPX1P07203 203 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 PKIAP61925 76 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 Q0VG73 95 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 Q6ZQT7 251 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 LOC389332A0A1B0GUA5 103 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 DEFB113Q30KQ7 82 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 KHDC1LQ5JSQ8 128 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 SAPCD1Q5SSQ6 148 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 RNF114Q9Y508 228 aa8.55□□□□□ -1.04
TCOF1-203ENST00000394269 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.54□□□□□ -1.04
TCOF1-203ENST00000394269 M0QZK8 103 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 M0R2Z0 102 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 EREGO14944 169 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 PAFAH1B2P68402 229 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 TWIST1Q15672 202 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 ALKBH7Q9BT30 221 aaPredicted RBP8.54□□□□□ -1.04
TCOF1-203ENST00000394269 NPFFR1Q9GZQ6 430 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 HIVEP1P15822 2718 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 F6UB75 175 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 HOXA3O43365 443 aaPredicted RBP8.54□□□□□ -1.04
TCOF1-203ENST00000394269 SPRY2O43597 315 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 IGF1P05019 195 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 TMEM78Q5T7P6 136 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 AGPAT4-IT1Q9H0P7 198 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 NIT1Q86X76 327 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 KCNS1Q96KK3 526 aa8.54□□□□□ -1.04
TCOF1-203ENST00000394269 KMT2BQ9UMN6 2715 aaPredicted RBP8.53□□□□□ -1.04
TCOF1-203ENST00000394269 ZNF324O75467 553 aaPredicted RBP8.53□□□□□ -1.04
TCOF1-203ENST00000394269 GATA3P23771 443 aa8.53□□□□□ -1.04
TCOF1-203ENST00000394269 RIGQ13278 110 aa8.53□□□□□ -1.04
TCOF1-203ENST00000394269 OR10J3Q5JRS4 329 aa8.53□□□□□ -1.04
TCOF1-203ENST00000394269 OR4B1Q8NGF8 309 aa8.53□□□□□ -1.04
TCOF1-203ENST00000394269 RHPN1-AS1Q9BWJ2 59 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms