RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 EMP1P54849 157 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 C2orf66Q6UXQ4 117 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 CLEC19AQ6UXS0 136 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 S4R3C0 116 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 PPIFP30405 207 aaKnown RBP6.8□□□□□ -1.32
GABRA1-202ENST00000393943 ODF1Q14990 250 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 FAM110DQ8TAY7 271 aaPredicted RBP6.8□□□□□ -1.32
GABRA1-202ENST00000393943 ZNRD1Q9P1U0 126 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 FREM1Q5H8C1 2179 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 SPAARA0A1B0GVQ0 90 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 THBDP07204 575 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 FXYD2P54710 66 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 PMVKQ15126 192 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 IGFL2Q6UWQ7 119 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 TPSG1Q9NRR2 321 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 WI2-2373I1.2A0A1W2PRP0 233 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 M0R2P5 195 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 IGKV1-17P01599 117 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 PRTN3P24158 256 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 C15orf32Q32M92 178 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 IGFL3Q6UXB1 125 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 LYPD2Q6UXB3 125 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 SVILO95425 2214 aa6.8□□□□□ -1.32
GABRA1-202ENST00000393943 IGHV3-23P01764 117 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 TRGV3P03979 118 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 EGR2P11161 476 aaPredicted RBP6.79□□□□□ -1.32
GABRA1-202ENST00000393943 PAX8Q06710 450 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 DUX4L9Q6RFH8 374 aaPredicted RBP6.79□□□□□ -1.32
GABRA1-202ENST00000393943 Q6ZS92 163 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 PRADC1Q9BSG0 188 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 PRO1854Q9UHT4 67 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 TPRP12270 2363 aaKnown RBP6.79□□□□□ -1.32
GABRA1-202ENST00000393943 E9PLD3 99 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 UFSP1Q6NVU6 142 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 C1orf159Q96HA4 380 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 EML6Q6ZMW3 1958 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 MAP1BP46821 2468 aaKnown RBP6.79□□□□□ -1.32
GABRA1-202ENST00000393943 FAM223BA6NKX1 122 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 LINC01619G3V211 115 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 K7ERJ3 54 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 TSPAN13O95857 204 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 TEN1Q86WV5 123 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 FAM223AQ8IWN6 122 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 JMJD8Q96S16 334 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 GLMPQ8WWB7 406 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 C7orf69Q9H7B7 122 aa6.79□□□□□ -1.32
GABRA1-202ENST00000393943 RNASE4P34096 147 aaKnown RBP6.78□□□□□ -1.32
GABRA1-202ENST00000393943 GAGE5Q13069 117 aa6.78□□□□□ -1.32
GABRA1-202ENST00000393943 GAGE6Q13070 117 aa6.78□□□□□ -1.32
GABRA1-202ENST00000393943 HCFC1P51610 2035 aa6.78□□□□□ -1.32
GABRA1-202ENST00000393943 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
GABRA1-202ENST00000393943 IGHV3-35A0A0C4DH35 117 aa6.78□□□□□ -1.32
GABRA1-202ENST00000393943 K7EIM0 57 aa6.78□□□□□ -1.32
GABRA1-202ENST00000393943 DUSP14O95147 198 aaKnown RBP6.78□□□□□ -1.32
GABRA1-202ENST00000393943 INTS1Q8N201 2190 aaKnown RBP6.78□□□□□ -1.32
GABRA1-202ENST00000393943 KIAA1549Q9HCM3 1950 aa6.77□□□□□ -1.32
GABRA1-202ENST00000393943 FOXI1Q12951 378 aa6.77□□□□□ -1.32
GABRA1-202ENST00000393943 ASPHD1Q5U4P2 390 aa6.77□□□□□ -1.32
GABRA1-202ENST00000393943 LINC00322Q6ZN03 302 aaPredicted RBP6.77□□□□□ -1.32
GABRA1-202ENST00000393943 VMO1Q7Z5L0 202 aa6.77□□□□□ -1.32
GABRA1-202ENST00000393943 BEX4Q9NWD9 120 aaPredicted RBP6.77□□□□□ -1.32
GABRA1-202ENST00000393943 TRGV11A0A075B6L2 103 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 WISP2O76076 250 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 CRYBA4P53673 196 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 ZNF672Q499Z4 452 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-202ENST00000393943 C8orf86Q6ZUL3 223 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 NPBQ8NG41 125 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 TNFRSF18Q9Y5U5 241 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 SELENOKQ9Y6D0 94 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 DOCK10Q96BY6 2186 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 C9JAW5 83 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 MED14OSP0DP75 135 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 PF4V1P10720 104 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 CNTFRP26992 372 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 FAM74A4Q5TZK3 123 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.77□□□□□ -1.33
GABRA1-202ENST00000393943 NPFFO15130 113 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
GABRA1-202ENST00000393943 TEX22C9J3V5 150 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 PLA2G5P39877 138 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 UCNP55089 124 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 OVOL2Q9BRP0 275 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 SPANXB1Q9NS25 103 aaPredicted RBP6.76□□□□□ -1.33
GABRA1-202ENST00000393943 H3BMM0 161 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 IFITM1P13164 125 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 WFDC2Q14508 124 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 C1orf122Q6ZSJ8 110 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 IL17RELQ6ZVW7 336 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 UBE2WQ96B02 151 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 TMEM101Q96IK0 257 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 USMG5Q96IX5 58 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 CCL21O00585 134 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 SLC25A20O43772 301 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 IGHV3-66A0A0C4DH42 116 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 DNAL4O96015 105 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 IGLC6P0CF74 106 aa6.76□□□□□ -1.33
GABRA1-202ENST00000393943 MRPL36Q9P0J6 103 aaKnown RBP6.76□□□□□ -1.33
GABRA1-202ENST00000393943 IGLV11-55A0A075B6I3 123 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms