RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 HLA-DQA1P01909 254 aa16.88■□□□□ 0.29
HMGA2-203ENST00000393578 FAM162BQ5T6X4 162 aa16.88■□□□□ 0.29
HMGA2-203ENST00000393578 RBPMS2Q6ZRY4 209 aaKnown RBP16.88■□□□□ 0.29
HMGA2-203ENST00000393578 KLHDC1Q8N7A1 406 aa16.88■□□□□ 0.29
HMGA2-203ENST00000393578 NRN1Q9NPD7 142 aa16.88■□□□□ 0.29
HMGA2-203ENST00000393578 HECTD1Q9ULT8 2610 aa16.87■□□□□ 0.29
HMGA2-203ENST00000393578 FASNP49327 2511 aaKnown RBP16.87■□□□□ 0.29
HMGA2-203ENST00000393578 IFITM10A6NMD0 228 aa16.87■□□□□ 0.29
HMGA2-203ENST00000393578 RAB4BP61018 213 aa16.87■□□□□ 0.29
HMGA2-203ENST00000393578 SOCS3O14543 225 aa16.86■□□□□ 0.29
HMGA2-203ENST00000393578 FOXA3P55318 350 aaPredicted RBP16.86■□□□□ 0.29
HMGA2-203ENST00000393578 ERCC8Q13216 396 aa16.86■□□□□ 0.29
HMGA2-203ENST00000393578 LINC00518Q8N0U6 118 aa16.86■□□□□ 0.29
HMGA2-203ENST00000393578 BMI1P35226 326 aa16.86■□□□□ 0.29
HMGA2-203ENST00000393578 RPL11P62913 178 aaKnown RBP16.86■□□□□ 0.29
HMGA2-203ENST00000393578 SCGB2A2Q13296 93 aa16.86■□□□□ 0.29
HMGA2-203ENST00000393578 GPR61Q9BZJ8 451 aa16.86■□□□□ 0.29
HMGA2-203ENST00000393578 REC114Q7Z4M0 266 aa16.85■□□□□ 0.29
HMGA2-203ENST00000393578 AGPAT4-IT1Q9H0P7 198 aa16.85■□□□□ 0.29
HMGA2-203ENST00000393578 A0A1B0GXF2 115 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 SH2D1AO60880 128 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 C9orf47Q6ZRZ4 202 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 Q6ZSV7 163 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 PGLYRP4Q96LB8 373 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 ESM1Q9NQ30 184 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 ACANP16112 2415 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 MYO9AB2RTY4 2548 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 IGHV4OR15-8A0A075B7B6 117 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 A0A087WW49 117 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 A8MWP6 167 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 LGALS9O00182 355 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 GZMBP10144 247 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 TMEM78Q5T7P6 136 aa16.84■□□□□ 0.29
HMGA2-203ENST00000393578 TMEM213A2RRL7 107 aa16.83■□□□□ 0.28
HMGA2-203ENST00000393578 PDZD11Q5EBL8 140 aa16.83■□□□□ 0.28
HMGA2-203ENST00000393578 C20orf173Q96LM9 149 aa16.83■□□□□ 0.28
HMGA2-203ENST00000393578 TMEM160Q9NX00 188 aa16.83■□□□□ 0.28
HMGA2-203ENST00000393578 PPP1R14DQ9NXH3 145 aa16.83■□□□□ 0.28
HMGA2-203ENST00000393578 S100A2P29034 98 aa16.82■□□□□ 0.28
HMGA2-203ENST00000393578 ZNF138P52744 262 aa16.82■□□□□ 0.28
HMGA2-203ENST00000393578 ZNF738Q8NE65 137 aa16.82■□□□□ 0.28
HMGA2-203ENST00000393578 APCSP02743 223 aa16.82■□□□□ 0.28
HMGA2-203ENST00000393578 EDN2P20800 178 aa16.82■□□□□ 0.28
HMGA2-203ENST00000393578 HOXD3P31249 432 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-203ENST00000393578 HBBP68871 147 aa16.82■□□□□ 0.28
HMGA2-203ENST00000393578 CRISP2P16562 243 aa16.81■□□□□ 0.28
HMGA2-203ENST00000393578 ZNF80P51504 273 aaPredicted RBP16.81■□□□□ 0.28
HMGA2-203ENST00000393578 SYNJ2BPP57105 145 aa16.81■□□□□ 0.28
HMGA2-203ENST00000393578 GDF5OSQ5U4N7 250 aa16.81■□□□□ 0.28
HMGA2-203ENST00000393578 SAMD13Q5VXD3 122 aa16.81■□□□□ 0.28
HMGA2-203ENST00000393578 Q6AWC8 147 aa16.81■□□□□ 0.28
HMGA2-203ENST00000393578 TMEM189A5PLL7 270 aa16.8■□□□□ 0.28
HMGA2-203ENST00000393578 CAMPP49913 170 aa16.8■□□□□ 0.28
HMGA2-203ENST00000393578 OVOL1O14753 267 aa16.8■□□□□ 0.28
HMGA2-203ENST00000393578 FABP5P3A8MUU1 101 aa16.79■□□□□ 0.28
HMGA2-203ENST00000393578 SRSF2Q01130 221 aaKnown RBP16.79■□□□□ 0.28
HMGA2-203ENST00000393578 TCTEX1D4Q5JR98 221 aa16.79■□□□□ 0.28
HMGA2-203ENST00000393578 GRIFINA4D1Z8 144 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 SLAQ13239 276 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 C4orf3Q8WVX3 66 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 HIST1H2BLQ99880 126 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 LENEPQ9Y5L5 61 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 IGKV3-7A0A075B6H7 116 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 HAX1O00165 279 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 SMIM6P0DI80 62 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 FABP4P15090 132 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 KLF5Q13887 457 aaPredicted RBP16.78■□□□□ 0.28
HMGA2-203ENST00000393578 C12orf57Q99622 126 aa16.78■□□□□ 0.28
HMGA2-203ENST00000393578 A0A1B0GUT8 65 aa16.77■□□□□ 0.28
HMGA2-203ENST00000393578 RNASE1P07998 156 aaKnown RBP16.77■□□□□ 0.28
HMGA2-203ENST00000393578 RPS20P60866 119 aaKnown RBP16.77■□□□□ 0.28
HMGA2-203ENST00000393578 Q0VG73 95 aa16.77■□□□□ 0.28
HMGA2-203ENST00000393578 KIAA1644Q3SXP7 199 aa16.77■□□□□ 0.28
HMGA2-203ENST00000393578 OR10J6PQ8NGY7 276 aa16.77■□□□□ 0.28
HMGA2-203ENST00000393578 LINC00477Q96M19 166 aa16.77■□□□□ 0.28
HMGA2-203ENST00000393578 C18orf65Q6ZTR6 163 aa16.77■□□□□ 0.27
HMGA2-203ENST00000393578 DCANP1Q8TF63 244 aa16.77■□□□□ 0.27
HMGA2-203ENST00000393578 SRD5A1P18405 259 aa16.76■□□□□ 0.27
HMGA2-203ENST00000393578 ID1P41134 155 aa16.76■□□□□ 0.27
HMGA2-203ENST00000393578 SSBP4Q9BWG4 385 aaPredicted RBP16.75■□□□□ 0.27
HMGA2-203ENST00000393578 TMSB15BA0A087X1C1 80 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 A0A1B0GUS0 222 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 A0A1B0GW15 77 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 LINC01619G3V211 115 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 RIGQ13278 110 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 DEFB136Q30KP8 78 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 OR10J3Q5JRS4 329 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 TMEM256Q8N2U0 113 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 OR10D4PQ8NGN7 298 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 ZNF418Q8TF45 676 aaPredicted RBP16.75■□□□□ 0.27
HMGA2-203ENST00000393578 SELENOKQ9Y6D0 94 aa16.75■□□□□ 0.27
HMGA2-203ENST00000393578 ANK3Q12955 4377 aaKnown RBP16.74■□□□□ 0.27
HMGA2-203ENST00000393578 C2orf70A6NJV1 201 aa16.74■□□□□ 0.27
HMGA2-203ENST00000393578 AMBPP02760 352 aa16.74■□□□□ 0.27
HMGA2-203ENST00000393578 ARMS2P0C7Q2 107 aa16.74■□□□□ 0.27
HMGA2-203ENST00000393578 ZNF705DP0CH99 300 aaPredicted RBP16.74■□□□□ 0.27
HMGA2-203ENST00000393578 ZNF705BP0CI00 300 aaPredicted RBP16.74■□□□□ 0.27
HMGA2-203ENST00000393578 SRIP30626 198 aa16.74■□□□□ 0.27
HMGA2-203ENST00000393578 HIST1H1AQ02539 215 aaPredicted RBP16.74■□□□□ 0.27
HMGA2-203ENST00000393578 WFDC12Q8WWY7 111 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms