RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 C9orf47Q6ZRZ4 202 aa16.39■□□□□ 0.21
HMGA2-202ENST00000393577 CCDC28AQ8IWP9 274 aa16.39■□□□□ 0.21
HMGA2-202ENST00000393577 FAM210BQ96KR6 192 aa16.39■□□□□ 0.21
HMGA2-202ENST00000393577 FAM19A4Q96LR4 140 aa16.39■□□□□ 0.21
HMGA2-202ENST00000393577 VGLL1Q99990 258 aa16.39■□□□□ 0.21
HMGA2-202ENST00000393577 Q9H3A6 140 aa16.39■□□□□ 0.21
HMGA2-202ENST00000393577 TIMM8BQ9Y5J9 83 aaPredicted RBP16.39■□□□□ 0.21
HMGA2-202ENST00000393577 DNAH6Q9C0G6 4158 aa16.38■□□□□ 0.21
HMGA2-202ENST00000393577 C7orf71A4D174 169 aa16.38■□□□□ 0.21
HMGA2-202ENST00000393577 SLC25A5P05141 298 aaKnown RBP16.38■□□□□ 0.21
HMGA2-202ENST00000393577 TMEM78Q5T7P6 136 aa16.38■□□□□ 0.21
HMGA2-202ENST00000393577 HSD17B11Q8NBQ5 300 aa16.38■□□□□ 0.21
HMGA2-202ENST00000393577 NOP10Q9NPE3 64 aaKnown RBP16.38■□□□□ 0.21
HMGA2-202ENST00000393577 A0A1W2PPV4 95 aa16.37■□□□□ 0.21
HMGA2-202ENST00000393577 KLLNB2CW77 178 aa16.37■□□□□ 0.21
HMGA2-202ENST00000393577 BTN1A1Q13410 526 aa16.37■□□□□ 0.21
HMGA2-202ENST00000393577 LYPD1Q8N2G4 141 aa16.37■□□□□ 0.21
HMGA2-202ENST00000393577 FXYD6-FXYD2A0A087WZ82 144 aa16.36■□□□□ 0.21
HMGA2-202ENST00000393577 CSN1S1P47710 185 aa16.36■□□□□ 0.21
HMGA2-202ENST00000393577 CD300CQ08708 224 aa16.36■□□□□ 0.21
HMGA2-202ENST00000393577 TMEM88Q6PEY1 159 aa16.36■□□□□ 0.21
HMGA2-202ENST00000393577 OR10G4Q8NGN3 311 aa16.36■□□□□ 0.21
HMGA2-202ENST00000393577 OR10G9Q8NGN4 311 aa16.36■□□□□ 0.21
HMGA2-202ENST00000393577 OR10G7Q8NGN6 311 aa16.36■□□□□ 0.21
HMGA2-202ENST00000393577 PYGO2Q9BRQ0 406 aa16.36■□□□□ 0.21
HMGA2-202ENST00000393577 P0DMU3 169 aa16.35■□□□□ 0.21
HMGA2-202ENST00000393577 FAM231AP0DMU4 169 aa16.35■□□□□ 0.21
HMGA2-202ENST00000393577 FAM231CP0DMU5 169 aa16.35■□□□□ 0.21
HMGA2-202ENST00000393577 CRISP2P16562 243 aa16.35■□□□□ 0.21
HMGA2-202ENST00000393577 INO80EQ8NBZ0 244 aaPredicted RBP16.35■□□□□ 0.21
HMGA2-202ENST00000393577 OR2T35Q8NGX2 323 aa16.35■□□□□ 0.21
HMGA2-202ENST00000393577 ZNF492Q9P255 531 aa16.35■□□□□ 0.21
HMGA2-202ENST00000393577 RNF222A6NCQ9 220 aa16.34■□□□□ 0.21
HMGA2-202ENST00000393577 HMGB3O15347 200 aaKnown RBP16.34■□□□□ 0.21
HMGA2-202ENST00000393577 GPX1P07203 203 aa16.34■□□□□ 0.21
HMGA2-202ENST00000393577 ATP6V0CP27449 155 aa16.34■□□□□ 0.21
HMGA2-202ENST00000393577 RNASE4P34096 147 aaKnown RBP16.34■□□□□ 0.21
HMGA2-202ENST00000393577 PQLC2Q6ZP29 291 aa16.34■□□□□ 0.21
HMGA2-202ENST00000393577 OR2G3Q8NGZ4 309 aa16.34■□□□□ 0.21
HMGA2-202ENST00000393577 Q8TAT8 98 aa16.34■□□□□ 0.21
HMGA2-202ENST00000393577 SNURFLB1AK76 121 aa16.33■□□□□ 0.2
HMGA2-202ENST00000393577 ZNF324O75467 553 aaPredicted RBP16.33■□□□□ 0.2
HMGA2-202ENST00000393577 ATP5G1P05496 136 aa16.33■□□□□ 0.2
HMGA2-202ENST00000393577 ATP5G3P48201 142 aa16.33■□□□□ 0.2
HMGA2-202ENST00000393577 PRR9Q5T870 116 aa16.33■□□□□ 0.2
HMGA2-202ENST00000393577 ZFAND2AQ8N6M9 145 aa16.33■□□□□ 0.2
HMGA2-202ENST00000393577 PSMG3Q9BT73 122 aaPredicted RBP16.33■□□□□ 0.2
HMGA2-202ENST00000393577 TNFSF18Q9UNG2 199 aa16.33■□□□□ 0.2
HMGA2-202ENST00000393577 CBY3A6NI87 242 aa16.32■□□□□ 0.2
HMGA2-202ENST00000393577 F5H768 121 aa16.32■□□□□ 0.2
HMGA2-202ENST00000393577 CDC34P49427 236 aaPredicted RBP16.32■□□□□ 0.2
HMGA2-202ENST00000393577 ZNF138P52744 262 aa16.32■□□□□ 0.2
HMGA2-202ENST00000393577 POM121L12Q8N7R1 296 aa16.32■□□□□ 0.2
HMGA2-202ENST00000393577 HYLS1Q96M11 299 aa16.32■□□□□ 0.2
HMGA2-202ENST00000393577 SH3BGRL3Q9H299 93 aa16.32■□□□□ 0.2
HMGA2-202ENST00000393577 OTORQ9NRC9 128 aa16.32■□□□□ 0.2
HMGA2-202ENST00000393577 RBAKDNA6NC62 111 aa16.31■□□□□ 0.2
HMGA2-202ENST00000393577 DIRC3C9JPN6 131 aa16.31■□□□□ 0.2
HMGA2-202ENST00000393577 NMBP08949 121 aa16.31■□□□□ 0.2
HMGA2-202ENST00000393577 PGPA6NDG6 321 aa16.3■□□□□ 0.2
HMGA2-202ENST00000393577 G3V3Q6 166 aa16.3■□□□□ 0.2
HMGA2-202ENST00000393577 ARL14EPLP0DKL9 152 aa16.3■□□□□ 0.2
HMGA2-202ENST00000393577 RPL7L1Q6DKI1 246 aaKnown RBP16.3■□□□□ 0.2
HMGA2-202ENST00000393577 UBE2DNLQ8IWF7 75 aa16.3■□□□□ 0.2
HMGA2-202ENST00000393577 RXFP4Q8TDU9 374 aa16.3■□□□□ 0.2
HMGA2-202ENST00000393577 RPH3ALQ9UNE2 315 aa16.3■□□□□ 0.2
HMGA2-202ENST00000393577 DNAH10Q8IVF4 4471 aa16.3■□□□□ 0.2
HMGA2-202ENST00000393577 BIRC6Q9NR09 4857 aa16.3■□□□□ 0.2
HMGA2-202ENST00000393577 FAM74A1Q5RGS3 127 aa16.29■□□□□ 0.2
HMGA2-202ENST00000393577 Q6ZQT7 251 aa16.29■□□□□ 0.2
HMGA2-202ENST00000393577 EIF4E3Q8N5X7 224 aaKnown RBP16.29■□□□□ 0.2
HMGA2-202ENST00000393577 LINC00612Q8N6U2 182 aa16.29■□□□□ 0.2
HMGA2-202ENST00000393577 C15orf53Q8NAA6 179 aa16.29■□□□□ 0.2
HMGA2-202ENST00000393577 ZNF680Q8NEM1 530 aa16.29■□□□□ 0.2
HMGA2-202ENST00000393577 CMTM2Q8TAZ6 248 aa16.29■□□□□ 0.2
HMGA2-202ENST00000393577 LINC00467Q9BRT7 94 aa16.29■□□□□ 0.2
HMGA2-202ENST00000393577 FRAS1Q86XX4 4008 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 TRBV7-9A0A0J9YWB2 115 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 GAGE12BA1L429 117 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 GAGE7O76087 117 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 MBP02144 154 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 GAGE12FP0CL80 117 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 GAGE12GP0CL81 117 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 GAGE12IP0CL82 117 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 STAG3L2P0CL84 134 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 STAG3L3P0CL85 134 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 SERF2P84101 59 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 RAB24Q969Q5 203 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 GSN-AS1Q9NRJ2 163 aa16.28■□□□□ 0.2
HMGA2-202ENST00000393577 BORCS7-ASMTA0A0B4J1R7 106 aa16.27■□□□□ 0.2
HMGA2-202ENST00000393577 RGS13O14921 159 aa16.27■□□□□ 0.2
HMGA2-202ENST00000393577 ANXA2RQ3ZCQ2 193 aa16.27■□□□□ 0.2
HMGA2-202ENST00000393577 C11orf72Q8NBR9 251 aa16.27■□□□□ 0.2
HMGA2-202ENST00000393577 DAZ2Q13117 558 aaKnown RBP16.26■□□□□ 0.19
HMGA2-202ENST00000393577 GNPNAT1Q96EK6 184 aaPredicted RBP16.26■□□□□ 0.19
HMGA2-202ENST00000393577 IGHV1OR15-1A0A075B7D0 117 aa16.25■□□□□ 0.19
HMGA2-202ENST00000393577 Q6ZTI0 123 aa16.25■□□□□ 0.19
HMGA2-202ENST00000393577 GOLT1AQ6ZVE7 132 aa16.25■□□□□ 0.19
HMGA2-202ENST00000393577 TP53TG3Q9ULZ0 132 aa16.25■□□□□ 0.19
HMGA2-202ENST00000393577 SMLR1H3BR10 107 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms