RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 FAM74A4Q5TZK3 123 aa-2.2□□□□□ -2.76
RNU6-1009P-201ENST00000390996 SFXN4Q6P4A7 337 aa-2.2□□□□□ -2.76
RNU6-1009P-201ENST00000390996 Q6ZRX8 168 aa-2.2□□□□□ -2.76
RNU6-1009P-201ENST00000390996 C3orf62Q6ZUJ4 267 aa-2.2□□□□□ -2.76
RNU6-1009P-201ENST00000390996 LINC00269Q8N2A0 174 aa-2.2□□□□□ -2.76
RNU6-1009P-201ENST00000390996 M0R036 132 aa-2.21□□□□□ -2.76
RNU6-1009P-201ENST00000390996 PFDN6O15212 129 aa-2.21□□□□□ -2.76
RNU6-1009P-201ENST00000390996 OR5G3P0C626 314 aa-2.21□□□□□ -2.76
RNU6-1009P-201ENST00000390996 BCL2L15Q5TBC7 163 aa-2.21□□□□□ -2.76
RNU6-1009P-201ENST00000390996 TMEM141Q96I45 108 aa-2.21□□□□□ -2.76
RNU6-1009P-201ENST00000390996 PPP1R2P1Q96PQ5 205 aa-2.21□□□□□ -2.76
RNU6-1009P-201ENST00000390996 OR4C12Q96R67 309 aa-2.21□□□□□ -2.76
RNU6-1009P-201ENST00000390996 COMMD3Q9UBI1 195 aa-2.21□□□□□ -2.76
RNU6-1009P-201ENST00000390996 TRAV26-2A0A0B4J265 109 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 LYRM1O43325 122 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 PYYP10082 97 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 ELOF1P60002 83 aaKnown RBP-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 PSME3P61289 254 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 UBE2BP63146 152 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 KLRD1Q13241 179 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 LYRM7Q5U5X0 104 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 C12orf45Q8N5I9 185 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 PPP1R1CQ8WVI7 109 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 OR51I1Q9H343 314 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 PKIGQ9Y2B9 76 aa-2.22□□□□□ -2.76
RNU6-1009P-201ENST00000390996 NUP98P52948 1817 aa-2.22□□□□□ -2.77
RNU6-1009P-201ENST00000390996 KALRNO60229 2985 aa-2.22□□□□□ -2.77
RNU6-1009P-201ENST00000390996 BBIP1A8MTZ0 92 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TPM2P07951 284 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 IDO1P14902 403 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 HIST2H3PS2Q5TEC6 136 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TCTEX1D1Q8N7M0 179 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 SLC35B4Q969S0 331 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 BET1LQ9NYM9 111 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TVP23BQ9NYZ1 205 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 ANK3Q12955 4377 aaKnown RBP-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 ROBO3Q96MS0 1386 aa-2.23□□□□□ -2.77
RNU6-1009P-201ENST00000390996 ANK1P16157 1881 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TRAV12-2A0A075B6T6 113 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 FXYD6-FXYD2A0A087WZ82 144 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TMEM30CPA0ZSE6 113 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 KPNA3O00505 521 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TPST1O60507 370 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 CCKP06307 115 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 RRN3P1Q2M238 152 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 Q6Q795 121 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TMEM86BQ8N661 226 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 DMAC1Q96GE9 116 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TEX37Q96LM6 180 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 CACYBPQ9HB71 228 aaKnown RBP-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 DLEC1Q9Y238 1755 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 LAMA3Q16787 3333 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 NBASA2RRP1 2371 aa-2.24□□□□□ -2.77
RNU6-1009P-201ENST00000390996 WRNQ14191 1432 aaPredicted RBP eCLIP-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 CDK12Q9NYV4 1490 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 hCG_1818297A0A087WSY0 165 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 LOC100506127A0A0U1RQW1 187 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 A8MT66 165 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 PSMB6P28072 239 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 DYNLT3P51808 116 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 DEFA3P59666 94 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 IQCJQ1A5X6 159 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 Q3ZCU0 254 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 LYPD5Q6UWN5 251 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 IZUMO2Q6UXV1 221 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 RAB8BQ92930 207 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TREM1Q9NP99 234 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 SPCS1Q9Y6A9 102 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 BICRAQ9NZM4 1560 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 ZZEF1O43149 2961 aa-2.25□□□□□ -2.77
RNU6-1009P-201ENST00000390996 C3orf85A0A1B0GTC6 90 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 APOC4-APOC2K7ER74 178 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TMEM256-PLSCR3K7ERE1 68 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 IGKCP01834 107 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TAS2R41P59536 307 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 PMS2P3Q13401 168 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 IMPG1Q17R60 797 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TMEM229BQ8NBD8 167 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 DCUN1D5Q9BTE7 237 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 EFCAB11Q9BUY7 163 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 LSM5Q9Y4Y9 91 aaKnown RBP-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 EVC2Q86UK5 1308 aa-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 ZCCHC6Q5VYS8 1495 aaKnown RBP-2.26□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TAX1BP3O14907 124 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 RER1O15258 196 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 GGCTO75223 188 aaKnown RBP-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 COX4I1P13073 169 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 RPS12P25398 132 aaKnown RBP-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 HAMPP81172 84 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 INSL4Q14641 139 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 DNAJB3Q8WWF6 145 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 ATG5Q9H1Y0 275 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 OR52A5Q9H2C5 316 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 AGPAT3Q9NRZ7 376 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 RAD50Q92878 1312 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 ABCC11Q96J66 1382 aa-2.27□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TEX49A0A1B0GTD5 131 aa-2.28□□□□□ -2.77
RNU6-1009P-201ENST00000390996 ARL5CA6NH57 179 aa-2.28□□□□□ -2.77
RNU6-1009P-201ENST00000390996 IFITM5A6NNB3 132 aa-2.28□□□□□ -2.77
RNU6-1009P-201ENST00000390996 TMEM14DPA8MWL7 114 aa-2.28□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms