RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 A0A087WSZ3 146 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 TRBV6-8A0A0A6YYG3 113 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 LOC100130705A0A1B0GUX0 176 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 FAM92AA1XBS5 289 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 C9orf170A2RU37 121 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 A6NN06 94 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 MIF4GDA9UHW6 222 aaKnown RBP0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 ZNF736B4DX44 427 aaPredicted RBP0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 ATP6V1G2-DDX39BF2Z307 99 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 F6UZH7 168 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 CDC42EP2O14613 210 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 ERC2-IT1O76042 136 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 NCR2O95944 276 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 IFNGP01579 166 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 IGKV4-1P06312 121 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 SAA1P0DJI8 122 aaPredicted RBP0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 PYYP10082 97 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 CCL4P13236 92 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 S100PP25815 95 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 BRS3P32247 399 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 PLGLB1Q02325 96 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 PDE6HQ13956 83 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 CCSMST1Q4G0I0 132 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 MEIG1Q5JSS6 88 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 C1orf137Q5JT78 98 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 MIC13Q5XKP0 118 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 C2orf82Q6UX34 121 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 IZUMO2Q6UXV1 221 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 BRD3OSQ6XYD6 125 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 FP248Q71RG6 208 aaPredicted RBP0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 ARPINQ7Z6K5 226 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 COA5Q86WW8 74 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 RPS19BP1Q86WX3 136 aaKnown RBP0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 GKN2Q86XP6 184 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 OR5AS1Q8N127 324 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 Q8N2B8 174 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 C15orf53Q8NAA6 179 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 OR10AC1Q8NH08 325 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 OR5AK2Q8NH90 309 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 DPH3Q96FX2 82 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 SLC35B3Q9H1N7 401 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 SCN3BQ9NY72 215 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 METTL1Q9UBP6 276 aaKnown RBP0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 MPC1Q9Y5U8 109 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 BRWD1Q9NSI6 2320 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 VIRMAQ69YN4 1812 aaKnown RBP0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 FRMPD1Q5SYB0 1578 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 INTS1Q8N201 2190 aaKnown RBP0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 MYH6P13533 1939 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 MYH13Q9UKX3 1938 aa0.56□□□□□ -2.32
TRAJ3-201ENST00000390534 RGS12O14924 1447 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 PRG4Q92954 1404 aaPredicted RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 TCOF1Q13428 1488 aaKnown RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 CACNA1GO43497 2377 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 KDM5BQ9UGL1 1544 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 PLXNA3P51805 1871 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 PEG3Q9GZU2 1588 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 TRBV20-1A0A075B6N2 111 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 TRBV6-5A0A0K0K1A5 114 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 PNMA8CA0A1B0GUJ8 204 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 SPAARA0A1B0GVQ0 90 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 F8W1H4 67 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 CORTO00230 105 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 CCL16O15467 120 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 EDF1O60869 148 aaKnown RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 PITX3O75364 302 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 AKAIN1P0CW23 69 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 CXCL8P10145 99 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 PRB4P10163 310 aaPredicted RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 HIST1H1DP16402 221 aaKnown RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 ETV6P41212 452 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 GUCA1AP43080 201 aaPredicted RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 KRTAP10-8P60410 259 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 WHAMMP3Q1A5X7 153 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 KRTAP13-3Q3SY46 172 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 OCIAD2Q56VL3 154 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 LCE1EQ5T753 118 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 FOXI2Q6ZQN5 318 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 Q6ZRN7 208 aaPredicted RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 ZCCHC23Q6ZST2 131 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 ZNF833PQ6ZTB9 187 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 SNX29P2Q8IUI4 249 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 KCNRGQ8N5I3 272 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 TCTEX1D1Q8N7M0 179 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 C5orf17Q8NAS9 161 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 TMEM203Q969S6 136 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 CIB3Q96Q77 187 aaPredicted RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 C12orf57Q99622 126 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 SMIM7Q9BQ49 75 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 SEC11CQ9BY50 192 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 LCE3DQ9BYE3 92 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 REG4Q9BYZ8 158 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 TMEM191AQ9H0A3 160 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 SAR1AQ9NR31 198 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 SOX21Q9Y651 276 aaPredicted RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 HELZP42694 1942 aaKnown RBP0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 KIAA1107Q9UPP5 1409 aa0.55□□□□□ -2.32
TRAJ3-201ENST00000390534 COL11A1P12107 1806 aaPredicted RBP0.54□□□□□ -2.32
TRAJ3-201ENST00000390534 COL1A1P02452 1464 aaPredicted RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 1222.4 ms