RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 CIRBPQ14011 172 aaKnown RBP2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 KISS1Q15726 138 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 ZNF79Q15937 498 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 CFAP126Q5VTH2 177 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 CEND1Q8N111 149 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 ZFAND2AQ8N6M9 145 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 SIGLECL1Q8N7X8 197 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 OR8B3Q8NGG8 313 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 SPTSSAQ969W0 71 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 TRGV9Q99603 122 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 C11orf1Q9H5F2 150 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 C8orf17Q9NRJ1 99 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 CELA1Q9UNI1 258 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 MEGF6O75095 1541 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 RGPD8O14715 1765 aaPredicted RBP2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 RGPD5Q99666 1765 aa2.4□□□□□ -2.03
TRAJ17-201ENST00000390520 ATP7BP35670 1465 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 TET2Q6N021 2002 aaPredicted RBP2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 PCNX3Q9H6A9 2034 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 ABCC6O95255 1503 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 WIZO95785 1651 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 IGLV1-50A0A075B6I6 118 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 IGKV3D-20A0A0C4DH25 116 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 A0A0J9YXY3 114 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 MDFIC2A0A1B0GVS7 189 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 NAP1L6A6NFF2 107 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 UMAD1C9J7I0 102 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 CCL16O15467 120 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV3-7P01780 117 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 CCKP06307 115 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV3-30-3P0DP02 117 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 CCL3P10147 92 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 CCL5P13501 91 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 DYNLT1P63172 113 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 INSL4Q14641 139 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 HMGN2P46Q86SG4 172 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 CLEC2BQ92478 149 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 C1orf147Q96MC9 270 aaPredicted RBP2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 ODF3Q96PU9 254 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 SCGB3A1Q96QR1 104 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 DHRS4-AS1Q9P1J3 65 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 ZNF580Q9UK33 172 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 PHLDA3Q9Y5J5 127 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 IQGAP2Q13576 1575 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 NUMA1Q14980 2115 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 IFT172Q9UG01 1749 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 KIAA0556O60303 1618 aa2.39□□□□□ -2.03
TRAJ17-201ENST00000390520 ARHGEF17Q96PE2 2063 aaPredicted RBP2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 SVILO95425 2214 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 PCNX2A6NKB5 2137 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 PLXNB1O43157 2135 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 TRAV2A0A0B4J234 112 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV7-4-1A0A0J9YVY3 117 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 A0A1W2PQD3 144 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 PINLYPA6NC86 204 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 PRAC2D3DTV9 90 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 SOCS3O14543 225 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 PROP1O75360 226 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV3-23P01764 117 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 CXCL8P10145 99 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 COL5A3P25940 1745 aaPredicted RBP2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 KRTDAPP60985 99 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 Q1T7F1 81 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 RNASE13Q5GAN3 156 aaKnown RBP2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 EDC4Q6P2E9 1401 aaKnown RBP2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 ZFP2Q6ZN57 461 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 C16orf47Q6ZP98 133 aaPredicted RBP2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 VWDEQ8N2E2 1590 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 PFN4Q8NHR9 129 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 CMTM2Q8TAZ6 248 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 ZNF414Q96IQ9 312 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 OR8B2Q96RD0 313 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 NABP2Q9BQ15 211 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 SCRT1Q9BWW7 348 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 TANC1Q9C0D5 1861 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 ANKRD12Q6UB98 2062 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 LAMB1P07942 1786 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 EXPH5Q8NEV8 1989 aa2.38□□□□□ -2.03
TRAJ17-201ENST00000390520 MYOM1P52179 1685 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 ASXL1Q8IXJ9 1541 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 KIAA0586Q9BVV6 1533 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 PDCD11Q14690 1871 aaKnown RBP2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV3-21A0A0B4J1V1 117 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 J3QLW9 94 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 HOXB6P17509 224 aaKnown RBP2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 CKS2P33552 79 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 CMC4P56277 68 aaPredicted RBP2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 PROK1P58294 105 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 NANOS2P60321 138 aaKnown RBP2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 MPV17LQ2QL34 196 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 LUZP6Q538Z0 58 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 C9orf57Q5W0N0 161 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 CAMK2N1Q7Z7J9 78 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 ZNF524Q96C55 264 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 C8orf49Q96NF6 230 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 TTTY13Q9BZ97 58 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 PLA2G12AQ9BZM1 189 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms